DeCure's autonomous Cancer AI scientist is researching a drug-repurposing hypothesis for triple-negative breast cancer — screening already-approved drugs against its 45-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.
Disease moduleTriple-negative breast cancer maps to a 45-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.
Research record
01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash
Current lead
approvedDocetaxelApproved drug
Structures already discussed alongside triple-negative breast cancer in the retrieved literature, rendered from public PubChem SMILES. Which drugs appear here reflects the evidence found, not a ranked prediction.
Molecular view
TUBULIN ALPHA-BETA DIMER, ELECTRON DIFFRACTION — Docetaxel has a real, experimentally solved structure in complex with this target (PDB 1TUB, 3.7 Å). This is the drug's own deposited structure, not a prediction, and confirms it is a structurally characterised molecule rather than an untested guess.
Loading structure…
helix sheet txldrag to rotate · scroll to zoom
RCSB Protein Data Bank · entry 1TUB · 3.7 Å · ligand Docetaxel (TXL). Experimental structure, not a prediction.
What the evidence adds up to
Triple-negative breast cancer (TNBC) is defined by the absence of oestrogen receptor, progesterone receptor, and HER2 expression. In a 2008 immunohistochemical study of 116 breast cancer samples, 22 (19%) were triple-negative. That phenotype correlated significantly with larger tumour size, higher histological grade, positive lymph node status, p53 expression, and EGFR expression, but not with age, menopausal status, or VEGF protein. After a median follow-up of 96 months, 12 of the 22 TNBC patients had distant relapse compared with 20 of the 94 non-TNBC patients (p < 0.05). Triple-negative phenotype was inversely associated with overall survival (p < 0.05) but not significantly with disease-free survival (p = 0.2877). Tumour size, lymph node status, histological grade, and triple-negative phenotype each provided independent predictive power in a multivariate Cox model.
The same 2008 review noted that TNBC carries a poor prognosis and is insensitive to most available hormonal or targeted agents. Gene expression profiling had classified breast cancers into five subtypes, and the authors stated that limited understanding of TNBC biology presented a challenge for developing novel therapies. A 2013 review reiterated that TNBC is heterogeneous, that recurrence after resection is common, that survival is low, and that available treatment options after recurrence are few. Chemotherapy was described as the main treatment strategy, and the authors called for new molecular predictive markers and drug targets.
A 2014 paper reported results for 128 patients with operable TNBC who received surgery, adjuvant or neoadjuvant chemotherapy, and pre- or postoperative radiotherapy. The authors concluded that the combination treatment procedures were highly effective, and they traced five-year relapse-free and overall survival rates. A 2018 paper on metastatic TNBC similarly concluded that the combination treatments used were highly effective, and noted that the risk of relapse for TNBC is much higher for the first 3–5 years but then drops sharply and substantially below that of hormone-positive breast cancers. A 2019 review stated that TNBC is very responsive to neoadjuvant chemotherapy and that patients are more likely to achieve pathologic complete remission, which is associated with improved survival. The same review noted that TNBC lacks the molecular therapeutic targets expressed by other breast cancer subtypes.
What remains missing is prospective validation of molecular predictive signatures that could characterise TNBC subtypes and guide treatment selection. No targeted therapy has been shown in these abstracts to improve outcomes specifically for TNBC beyond standard chemotherapy. The evidence base consists of retrospective series and reviews; no randomised controlled trial data comparing a novel agent against standard care in a well-stratified TNBC population are presented. Funding for such trials and for the identification of actionable molecular targets is still needed.
Evidence
Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.
Current Opinion in Obstetrics & Gynecology · 2008 · 70 citations
Triple negative breast cancer: current understanding of biology and treatment options
AbstractPURPOSE OF REVIEW: We have made remarkable advances in treatment of breast cancer with combination chemotherapies, hormonal therapies, and modern targeted therapies. Triple negative breast cancers carry a poor prognosis, however, and they are insensitive to most available hormonal or targeted therapeutic agents thus far developed. A better understanding of pathophysiology, natural history, and currently available treatment options is necessary to improve outcomes of patients with triple negative breast cancer. RECENT FINDINGS: Gene expression profiling has allowed us to classify breast cancers into five subtypes based upon distinctive gene expression signatures. This subtyping is prognostic, and the recent literatures suggest that these 'molecular portraits' may be used to predict treatment outcomes in the future. SUMMARY: As we prepare for an era of targeted and individualized medicine, limited understanding of triple negative breast cancer biology presents a challenge in developing novel therapies. Identification of more molecular predictive signatures and their prospective validation will enable us to characterize triple negative breast cancers better and design optimal treatment modalities.
Oncology Research and Treatment · 2008 · 34 citations
Clinicopathologic and Prognostic Characteristics of Triple-Negative Breast Cancer
AbstractBACKGROUND: Triple-negative breast cancer (estrogen receptor (ER)-, progesterone receptor (PR)-, and HER2-negative) is a rare subtype with a poor prognosis. However, the clinicopathologic and prognostic characteristics of triple-negative breast cancer remain undetermined. MATERIALS AND METHODS: Immunohistochemical staining was adopted to examine the expressions of ER, PR, p53, C-erbB-2 (HER2), vascular endothelial growth factor (VEGF), and epidermal growth factor receptor (EGFR) protein in 116 samples of paraffin-embedded breast cancer tissues. RESULTS: 22 triple-negative breast cancers were found among 116 informative cases (19%). The triple-negative phenotype significantly correlates with tumor size, histological grade, lymph node status, p53, and EGFR (p < 0.05), and not significantly with age, menopausal status, and VEGF protein. After a median follow-up period of 96 months (range: 32-123 months), 12 triple-negative breast cancer patients and 20 patients with non-triple-negative phenotype had distant relapse (p < 0.05). Survival analysis showed that triple-negative phenotype was inversely associated with overall survival (p < 0.05) but not significantly with disease-free survival (p = 0.2877). Multivariate Cox model analysis showed that tumor size, lymph node status, histological grade, and triple-negative phenotype provided independent significant predictive power. CONCLUSION: Triple-negative breast cancer phenotype has specific clinical and biological characteristics. Patients with triple-negative breast cancer have a poorer prognosis. So far, there is no conclusive effective treatment, which necessitates further studies.
International Journal of Women s Health and Wellness · 2019 · 5 citations · open access
Triple-Negative Breast Cancer: What Crucial Information can Imaging Add to the Diagnosis, Treatment and Prognosis?
AbstractBreast cancer is a heterogeneous disease, with many distinct subtypes having extremely different presentations, biological aggressiveness, and response to therapy. Triple-negative breast cancer is a subtype with significant clinical implications because of its poor prognosis and aggressive behavior. It has distinct imaging features, often presenting as a mass with typically benign features on mammography and ultrasound and more suspicious findings on magnetic resonance imaging. Triple-negative breast cancer also has unique treatment limitations, with these cancers lacking molecular therapeutic targets expressed by other breast cancer subtypes. Fortunately, Triple-negative breast cancer is very responsive to neoadjuvant chemotherapy, which is the mainstay of treatment for these patients. Patients with triple-negative breast cancer are more likely to achieve pathologic complete remission, which is associated with improved survival.
DOAJ (DOAJ: Directory of Open Access Journals) · 2014 · 0 citations · open access
Results of combination treatment for triple-negative breast cancer
AbstractThe authors give the results of treatment in 128 patients with operable triple-negative breast cancer (BC). All the patients underwent surgical intervention, the volume of which depended on the stage of the disease. The efficiency of adjuvant and neoadjuvant chemotherapy, as well as pre- and postoperative radiotherapy was evaluated. The side effects of different treatment options were analyzed. Five-year relapse-free and overall survival rates were traced in this patient group. It is concluded that the used procedures of combination treatment for operable triple- negative BC are highly effective.
Internal Medicine Open Access · 2018 · 0 citations · open access
Treatment of Various Chemotherapy Regimens for Metastatic Breast Cancer with a Triple Negative Phenotype
AbstractBreast cancer (BC) is the most common cancer in women worldwide. This paper presents results of treating patients with metastatic triple-negative breast cancer (BC). All the patients underwent surgical intervention, adjuvant, neoadjuvant chemotherapy and radiotherapy were evaluated the volume of which depended on the stage of the disease. The side effects of different treatment options were analyzed. Triple-negative breast cancers have a relapse pattern that is very different from hormone-positive breast cancers: the risk of relapse is much higher for the first 3-5 years but drops sharply and substantially below that of hormone-positive breast cancers after that. Five-year relapse-free and overall survival rates were traced in this patient group. It is concluded that the used procedures of combination treatment for metastatic triple-negative BC are highly effective.
New understanding and research progression for triplenegative breast cancer
AbstractTriple-negative breast cancer (TNBC) is a heterogeneous disease.It has distinct risk factors,molecular biology features,clinical presentations and prognosis.TNBC recurrence is common after resection,and the survival rate is low and available treatment options are few after recurrence.To date,chemotherapy is the main treatment strategy for TNBC.There is a great need for new molecular predictive marks and drug targets for improving the efficacy of TNBC treatment.
Key words:
Breast neoplasms; Drug therapy; Triple-negative
Kaplan-Meier analyses of (A) relapse free and (B) overall survival according to triple negative and non-triple negative breast cancer
Abstract<b>Copyright information:</b>Taken from "Prognostic impact of clinicopathologic parameters in stage II/III breast cancer treated with neoadjuvant docetaxel and doxorubicin chemotherapy: paradoxical features of the triple negative breast cancer"http://www.biomedcentral.com/1471-2407/7/203BMC Cancer 2007;7():203-203.Published online 1 Nov 2007PMCID:PMC2217558.
Kaplan-Meier analyses of survival according to clinical and pathologic stages
Abstract<b>Copyright information:</b>Taken from "Prognostic impact of clinicopathologic parameters in stage II/III breast cancer treated with neoadjuvant docetaxel and doxorubicin chemotherapy: paradoxical features of the triple negative breast cancer"http://www.biomedcentral.com/1471-2407/7/203BMC Cancer 2007;7():203-203.Published online 1 Nov 2007PMCID:PMC2217558.
Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.
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