Cancer Lab · DeCure for X

DeCure for Precursor B-cell acute lymphoblastic leukemia

DeCure's autonomous Cancer AI scientist is researching a drug-repurposing hypothesis for precursor B-cell acute lymphoblastic leukemia — screening already-approved drugs against its 10-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

Disease module10 genesLead labCancer
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CancerDOID:0080638$DeCureCancer

The disease map

Disease modulePrecursor B-cell acute lymphoblastic leukemia maps to a 10-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

approved
PonatinibApproved drug

Structures already discussed alongside precursor b-cell acute lymphoblastic leukemia in the retrieved literature, rendered from public PubChem SMILES. Which drugs appear here reflects the evidence found, not a ranked prediction.

Molecular view

AP24534, a Pan-BCR-ABL Inhibitor for Chronic Myeloid Leukemia, Potently Inhibits the T315I Mutant and Overcomes Mutation-Based ResistancePonatinib has a real, experimentally solved structure in complex with this target (PDB 3IK3, 1.9 Å). This is the drug's own deposited structure, not a prediction, and confirms it is a structurally characterised molecule rather than an untested guess.

Loading structure…
helix sheet 0lidrag to rotate · scroll to zoom

RCSB Protein Data Bank · entry 3IK3 · 1.9 Å · ligand Ponatinib (0LI). Experimental structure, not a prediction.

What the evidence adds up to

In a 2014 mouse model study, two small-molecule SYK inhibitors, fostamatinib and BAY61-3606, attenuated the growth of 69 human B-ALL samples in vitro, including high-risk subtypes. Orally administered fostamatinib reduced heavy disease burden after xenotransplantation of high-risk B-ALL samples into immunodeficient mice and decreased leukaemia dissemination into spleen, liver, kidneys, and the central nervous system. The authors concluded that SYK activation sustains the growth of multiple high-risk B-ALL subtypes.

A 2022 study examined CD79b as a therapeutic target in B-cell precursor acute lymphoblastic leukaemia. Surface CD79b positivity, defined as ≥10% positive cells, was detected in 23 of 94 (24%) paediatric diagnostic samples across subgroups: 5/24 E2A-PBX1+, 5/20 BCR-ABL+, 2/13 MLL rearranged, 7/17 TEL-AML1+, and 4/20 B-other. In a murine transplantation model, BCR-ABL1-transformed cells lacking a functional CD79b ITAM did not engraft; control animals were sacrificed by day 25, while mice with the CD79b-ITAM-KO cells were still leukaemia-free at 162 days. In patient-derived xenograft models of minimal residual disease, an unconjugated anti-CD79b antibody produced a small reduction in spleen and bone marrow burden in E2A-PBX1+ samples and a significant reduction in BCR-ABL+ samples, and significantly reduced CNS involvement in both models (P = 0.0302 and P = 0.0098). The CD79b antibody-drug conjugate Polatuzumab Vedotin (PolVed) led to significantly reduced spleen sizes and blast numbers in spleen and bone marrow compared with controls (P < 0.0001 for both PDX models), and all PolVed-treated mice were CNS negative at the time controls were sacrificed. Survival analysis showed median overall survival of 106 days versus not definable for E2A-PBX1+ (P = 0.0027) and 76 versus 148 days for BCR-ABL+ (P = 0.0027); 4/5 PolVed-treated E2A-PBX1+ mice were free of leukaemia at experiment termination at 236 days. In a phase 2-like PDX study using 4 sCD79b-positive and 8 sCD79b-negative samples, PolVed produced blast reduction in 4/4 sCD79b-positive but only 1/8 sCD79b-negative samples. Survival was significantly prolonged in sCD79b-positive mice (median 91.5 versus 178 days, P = 0.0285) but not in sCD79b-negative mice (84 versus 91.5 days). One sCD79b-negative sample with 6.8% positive cells also responded.

A 2022 review notes that therapy-related acute lymphoblastic leukaemia is a distinct entity with inferior survival compared with de novo disease. A 2022 German review states that over 60 years, treatment outcomes for paediatric B-cell precursor ALL have improved to approximately 90% long-term survival, but that new drugs such as immunotherapy and molecular targeted therapy, as well as more precise stratification, are required. A 2024 review discusses the role of CK2 and IKAROS in Philadelphia-like ALL, noting that hyperphosphorylation cascades inhibit the differentiating function of IKZF1 as a tumour suppressor gene, but provides no new experimental data.

What is still missing: the SYK inhibitor data are from 2014 and have not progressed to clinical trials in B-ALL. PolVed has not been tested in combination with standard chemotherapy in preclinical models, nor in relapsed or CD19-negative patients. The proportion of patients who might benefit is limited to the roughly 24% with surface CD79b expression, and the optimal cutoff for response is not established. No clinical trial data in humans exist for either approach in this disease.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

Science Translational Medicine · 2014 · 34 citations

Therapeutic Potential of Spleen Tyrosine Kinase Inhibition for Treating High-Risk Precursor B Cell Acute Lymphoblastic Leukemia

AbstractIntensified and central nervous system (CNS)-directed chemotherapy has improved outcomes for pediatric B cell acute lymphoblastic leukemia (B-ALL) but confers treatment-related morbidities. Moreover, many patients suffer relapses, underscoring the need to develop new molecular targeted B-ALL therapies. Using a mouse model, we show that leukemic B cells require pre-B cell receptor (pre-BCR)-independent spleen tyrosine kinase (SYK) signaling in vivo for survival and proliferation. In diagnostic samples from human pediatric and adult B-ALL patients, SYK and downstream targets were phosphorylated regardless of pre-BCR expression or genetic subtype. Two small-molecule SYK inhibitors, fostamatinib and BAY61-3606, attenuated the growth of 69 B-ALL samples in vitro, including high-risk (HR) subtypes. Orally administered fostamatinib reduced heavy disease burden after xenotransplantation of HR B-ALL samples into immunodeficient mice and decreased leukemia dissemination into spleen, liver, kidneys, and the CNS of recipient mice. Thus, SYK activation sustains the growth of multiple HR B-ALL subtypes, suggesting that SYK inhibitors may improve outcomes for HR and relapsed B-ALL.

https://doi.org/10.1126/scitranslmed.3008661
HemaSphere · 2022 · 10 citations · open access

Preclinical Evidence for the Efficacy of CD79b Immunotherapy in B-cell Precursor Acute Lymphoblastic Leukemia

AbstractPatients with B-cell precursor acute lymphoblastic leukemia (BCP-ALL) have a favorable prognosis. However, current treatment protocols are based on intensive cytotoxic chemotherapy and therapy options are limited when patients relapse.1 Hence, there is an urgent need for novel immunotherapy approaches. A potential novel target could be the pre-B-cell receptor (pre-BCR) signaling complex for which an integral role in B-cell malignancies has been proposed.2 The pre-BCR consists of the µ heavy chain (µHC), the surrogate light chain (VpreB and Lambda 5), and a signaling heterodimer composed of CD79a (Igα) and CD79b (Igβ). Activation of the pre-BCR induces downstream signaling via phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAMs) of the cytoplasmic tails of CD79a/CD79b.3 Due to its high abundance on mature B cells, the BCR complex has become an important target for diffuse large B-cell lymphoma (DLBCL) treatment and the CD79b antibody drug conjugate (ADC) Polatuzumab Vedotin (PolVed) has shown therapeutic efficacy in DLBCL-frontline treatment.4 Nevertheless, the CD79a/CD79b heterodimer is already expressed at the pro-B-cell stage before a productive immunoglobulin gene rearrangement is accomplished, even without associated µHC.5 Moreover, we recently reported that the pre-BCR signaling unit CD79a is crucial for BCP-ALL engraftment in vivo, particularly in the central nervous system (CNS), in BCR-ABL1+ and E2A-PBX1+ patient-derived xenograft (PDX) models.6 We therefore hypothesized that CD79b may also serve as a therapeutic target in BCP-ALL. Here, we show that surface (s)CD79b is expressed in different subgroups of pediatric BCP-ALL patients and that targeting CD79b with a monoclonal antibody reduced CNS involvement of sCD79b positive (sCD79b+) PDX samples in vivo. Moreover, the CD79b-ADC PolVed significantly diminished overall leukemia burden and prolonged mouse survival in sCD79b+ BCP-ALL-PDX models of different cytogenetic backgrounds. First, to test whether CD79b is important for leukemic engraftment, we applied a murine/murine transplantation model as described previously.6 Murine precursor B cells harboring a truncated cytoplasmic tail of CD79b, which results in the loss of the ITAM and therefore functional CD79b7 (referred to as CD79b-ITAM-KO) were malignantly transformed by stable transduction with a BCR-ABL1-construct (Suppl. Figure S1A–B). Transformed CD79b-ITAM-KO cells showed a similar proliferation pattern as control (Ctr) cells in vitro (Suppl. Figure S1C). However, upon transplantation into NOD scid gamma (NSG) mice, Ctr cells exposed profound leukemia engraftment in the spleen (Sp; P = 0.0079), bone marrow (BM, P = 0.0079), and CNS (P = 0.0079) leading to sacrifice of all Ctr animals after 25 days while animals injected with CD79b-ITAM-KO cells did not show signs of leukemia at that timepoint (Figure 1A–C, Suppl. Figure S1D). An additional group of mice transplanted with CD79b-ITAM-KO cells was left for survival analysis and mice of this group were still free of leukemia upon termination of the experiment after 162 days (Figure 1C, Suppl. Figure S1E–F) indicating that CD79b is required for leukemia engraftment in vivo.Figure 1.: CD79b is important for BCP-ALL engraftment in vivo. CD79b is important for BCP-ALL engraftment in vivo: (A–C) Precursor B cells isolated from either wildtype BALB/c mice or mice carrying a truncated variant of CD79b (CD79b-ITAM-KO) were malignantly transformed with BCR-ABL1. Ctr and CD79b-ITAM-KO cells were injected into NSG mice (n = 5 Ctr, n = 10 CD79b-ITAM-KO). To examine niche specific engraftment, animals injected with CD79b-ITAM-KO cells (n = 5) were sacrificed when the mice injected with Ctr cells (n = 5) showed signs of overt leukemia (such as ataxia, splenomegaly, weight loss, or >70% leukemic cells in the peripheral blood; all Ctr animals had developed overt leukemia by day 25). One group of mice injected with CD79b-ITAM-KO (n = 5) was maintained for survival analysis. (A), Sp volumes (unpaired t test), and (B) percentage of ALL cells in Sp and BM were measured (unpaired, 2-sided t test). (C), Differences in mouse survival of animals injected with Ctr cells versus CD79b-ITAM-KO cells were determined using Kaplan-Meier log-rank statistics. The experiment was terminated after 162 d and mice bearing CD79b-ITAM-KO cells sacrificed without showing signs of overt leukemia. (D), Diagnostic BM or blood samples of BCP-ALL patients of different cytogenetic backgrounds were analyzed for surface (s)CD79b expression within the CD45dim/CD19+ BCP-ALL cell population. The blue line depicts the cutoff of 10% sCD79b+ cells. Positivity for CD79b was detected in 5/24 E2A-PBX1+, 5/20 BCR-ABL+, 2/13 MLLr, 7/17 TEL-AML1+, and 4/20 B-other BCP-ALL patients. (E–I), NSG mice were transplanted with BCP-ALL-PDX cells from an E2A-PBX1+ and a BCR-ABL+ patient and treated with a monoclonal blocking antibody against CD79b (anti-CD79b, 1 mg/kg) or a Ctr vehicle (n = 5, respectively) starting the day after injection, modeling an MRD situation (intravenous treatment on day +1, +3, +7, +14 and every 14 d thereafter as described previously8). Animals were sacrificed when the first mouse showed signs of overt leukemia and (E–F) volumes of extracted Sp (indicator for leukemic engraftment) were measured, unpaired 2-sided t test. (G), Representative hematoxylin/eosin-stained histology sections of NSG mouse heads of Ctr and anti-CD79b treated E2A-PBX1+ PDX mice, red lines indicate blast-filled areas (B = bone, BM = bone marrow, C = cerebellum; Ctr = control; SA = subarachnoid space). (H–I), CNS infiltration was assessed by semi-quantitative scoring as described previously,6 , 8 Fisher exact test. BCP-ALL = B-cell precursor acute lymphoblastic leukemia; CNS = central nervous system; MLLr = MLL rearranged; MRD = minimal residual disease; n.s. = not significant; sCD79b+ = sCD79b positive; Sp = spleen.To identify patients who may benefit from CD79b-immunotherapy, we investigated the frequency of sCD79b expression in BCP-ALL patients. We measured sCD79b levels via flow cytometry in diagnostic BM/blood samples of pediatric BCP-ALL patients of different cytogenetics (gating strategy depicted in Suppl. Figure S2). Using a cutoff of ≥10% sCD79b+ BCP-ALL cells (according to AEIOP-BFM guidelines9), we detected sCD79b-positivity in 23 of 94 (24%) patient samples (Figure 1D). Interestingly, a population of sCD79b+ cases was detected in all subgroups investigated, including E2A-PBX1+ (5/24), BCR-ABL+ (5/20), MLL rearranged (MLLr) (2/13), TEL-AML1+ (7/17), and B-other (4/20) BCP-ALL patients. Due to the lack of BCP-ALL engraftment of transformed CD79b-ITAM-KO cells, we hypothesized that blocking CD79b with a monoclonal antibody reduces BCP-ALL engraftment in vivo. To test this hypothesis, we applied an unconjugated CD79b-IgG1-antibody (clone SN8, anti-CD79b) on NSG mice bearing either E2A-PBX1+ or BCR-ABL1+ PDX samples (Suppl. Table S1/PDX1-2) with high sCD79b expression (53.6% sCD79b+ cells and 25.9% sCD79b+ cells, respectively, Suppl. Figure S3, Suppl. Figure S4A–B). Animals were injected with 1 × 105 PDX cells and anti-CD79b-treatment was initiated 1 day post-injection (“minimal residual disease [MRD] model”8,10,11). All animals were sacrificed when the first mouse showed clinical signs of leukemia. Anti-CD79b-immunotherapy resulted in a small reduction of leukemia burden in the Sp and BM of E2A-PBX1+ PDX mice and a significant reduction of Sp and BM engraftment in BCR-ABL+ PDX mice (Figure 1E and F, Suppl. Figure S4C–F). Of note, anti-CD79b-treatment promoted a significant reduction of CNS involvement in both PDX models (P = 0.0302 and P = 0.0098, respectively; Figure 1G–I) indicating that CD79b blockade impacts the engraftment of BCP-ALL cells in vivo and survival of BCP-ALL cells in the CNS. Next, we investigated if CD79b-immunotherapy using a CD79b-ADC would outperform the efficacy of CD79b blockade. Hence, we performed the same in vivo experiment applying PolVed therapy in our sCD79b+ PDX-MRD models (Suppl. Table S1/PDX1-2). Indeed, PolVed therapy led to a profound anti-leukemic effect in both PDX models showing significantly reduced Sp sizes as well as blast numbers in Sp and BM as compared with Ctr animals (P < 0.0001, respectively; Figure 2A and B; Suppl. Figure S5A–B). Accordingly, all PolVed-treated PDX mice were CNS negative upon sacrifice of Ctr animals (P = 0.0079, respectively; Figure 2C and D). Analysis of further PolVed-treated animals (n = 5), which were left for survival analysis, showed a significant survival prolongation under PolVed therapy in both PDX models (median overall survival [MOS] 106 d versus not definable; P = 0.0027 and 76 versus 148 d; P = 0.0027; Figure 2E and F). Of note, 4/5 PolVed-treated E2A-PBX1+ PDX mice were free of BCP-ALL-PDX cells upon termination of the experiment after 236 days (Figure 2E, Suppl. Figure S5C).Figure 2.: PolVed shows preclinical efficacy in sCD79b positive PDX samples in vivo. PolVed shows preclinical efficacy in sCD79b positive PDX samples in vivo: (A–F) NSG mice were transplanted with BCP-ALL-PDX cells from an E2A-PBX1+ and a BCR-ABL+ patient and treated with the CD79b-ADC PolVed (1 mg/kg, n = 10) or a Ctr vehicle (n = 5) starting the day after injection, modeling an MRD situation (intravenous treatment on day +1, +3, +7, +14 and every 14 d thereafter as described previously8). Five animals, respectively, were sacrificed when the first mouse showed signs of overt leukemia (such as ataxia, splenomegaly, weight loss, or >70% leukemic cells in the PB; all Ctr animals had developed overt leukemia at this time point). One group of mice treated with PolVed (n = 5) was maintained for survival analysis. (A and B), Volumes of extracted spleens (indicator for leukemic engraftment) were measured, unpaired 2-sided t test. (C and D), CNS infiltration was assessed by semi-quantitative scoring as described previously,6 , 8 Fisher exact test. (E and F), Therapy-associated differences in the survival of NSG mice bearing E2A-PBX1+ or BCR-ABL+ BCP-ALL cells were determined using Kaplan-Meier log-rank statistics. The experiment was terminated after 236 d and 4/5 BCR-ABL+ PDX mice treated with PolVed were sacrificed without showing signs overt leukemia. (G–I), A phase 2-like PDX study was performed using sCD79b-positive (≥10% sCD79b+ cells, n = 4), and CD79b-negative (<10% sCD79b+ cells, n = 8) PDX samples from different cytogenetic subgroups (5xE2A-PBX1+, 3xBCR-ABL+, 2xMLLr, 1xE2A-HLF+, and 1xETV6-NTRK3+). Two NSG mice per patient were injected with PDX cells, randomly assigned into treatment groups and PolVed therapy was initiated upon detection of 1% PDX cells in the PB, modeling an overt leukemia situation. (G), Blood of both, Ctr and PolVed treated animals bearing the same PDX sample was withdrawn when one of the 2 PDX mice showed signs of overt leukemia and the number of hCD45+/hCD19+/mCD45– cells in the PB was measured via flow cytometry. The waterfall plot shows the difference in PB blasts between respective Ctr and PolVed treated mice normalized to the maximum blast reduction (sorted from weakest therapy response to highest therapy response). Animals not showing clinical signs of overt leukemia or >70% PB blasts at this timepoint received further treatment until reaching termination criteria. Therapy-associated differences in the survival of NSG mice bearing (H) sCD79b– and (I) sCD79b+ PDX cells were determined using Kaplan-Meier log-rank statistics. ADC = antibody drug conjugate; BCP-ALL = B-cell precursor acute lymphoblastic leukemia; BCP-ALL-PDX = B-cell precursor acute lymphoblastic leukemia-patient-derived xenograft; CNS = central nervous system; Ctr = control; hCD45+/hCD19+/mCD45– = human (h)CD45+hCD19+(murine) mCD45-; MLLr = MLL rearranged; MRD = minimal residual disease; ns = not significant; NSG = NOD scid gamma; PB = peripheral blood; PDX = patient-derived xenograft; PolVed = Polatuzumab Vedotin.To further validate the target-specificity of PolVed in sCD79b+ BCP-ALL cells, we compared the efficacy of PolVed to that of the CD30-ADC Brentuximab Vedotin (BreVed) in vivo in the E2A-PBX1+ sCD79b+/CD30– PDX model (Suppl. Figure S6A, Suppl. Table S1/PDX1). PolVed had anti-leukemic efficacy and BreVed treatment resulted in Sp sizes and blast counts in Sp and BM comparable with that of Ctr animals suggesting that PolVed kills BCP-ALL cells in a target-specific manner (Suppl. Figure S6B–C). Finally, to test the efficacy of PolVed treatment in a broad range of BCP-ALL samples, we performed a phase 2-like PDX study10–12 using sCD79b+ (≥10% sCD79b+ cells, n = 4) and CD79b– (<10% sCD79b+ cells, n = 8) PDX samples from different cytogenetic subgroups (5xE2A-PBX1+, 3xBCR-ABL+, 2xMLLr, 1xE2A-HLF+, and 1xETV6-NTRK3+, Suppl. Table S1/PDX1-12). Two NSG mice per patient were injected with PDX cells, randomly assigned into groups and PolVed therapy was initiated upon detection of 1% PDX cells in the peripheral blood, modeling overt leukemia (Suppl. Figure S7).10–12 When one of the 2 mice (Ctr or PolVed therapy) bearing the same PDX-sample developed clinical signs of overt leukemia, the peripheral blood of both PDX mice was analyzed for the number of BCP-ALL cells. This analysis showed a distinct blast reduction in 4/4 sCD79b+, but only 1/8 sCD79b– PDX samples in vivo upon PolVed therapy (Figure 2G, Suppl. Table S1). Moreover, survival analysis revealed that whereas Ctr and PolVed-treated sCD79b– animals showed comparable median survival times (MOS = 84 versus 91.5 d; Figure 2H), PolVed treatment led to a significant survival prolongation in sCD79b+ PDX mice (MOS = 91.5 versus 178 d; P = 0.0285; Figure 2I). This group included 1xE2A-PBX1+, 2xBCR-ABL+, and 1xMLLr PDX models (Suppl. Table S1). Interestingly, 1 sCD79b– PDX-sample exposing a distinct population of sCD79b+ cells (6.8% sCD79b+ cells, E2A-HLF+ BCP-ALL) displayed substantial response and survival prolongation upon PolVed therapy (Figure 2G, Suppl. Table S1/PDX5). These data indicate that PolVed-immunotherapy may be effective in sCD79b+ cases of different BCP-ALL subgroups. Antibody-based immunotherapies such as Blinatumomab have become an important tool in BCP-ALL treatment. Yet, the observation of tumor immune-escape via downregulation of the target-antigen, for example, CD19 motivates the identification of novel immunotherapy targets.13 We show the presence of CD79b on the surface of diagnostic patient samples of different BCP-ALL subgroups. This is particularly interesting as previous reports suggested that only certain cytogenetic subgroups such as E2A-PBX1+ BCP-ALL are considered as pre-BCR positive, whereas most BCP-ALL cases, including BCR-ABL+ BCP-ALL do not express µHC and therefore a functional pre-BCR on the cell surface.14 Our data promote the view that CD79b is expressed on the surface of BCP-ALL cells irrespective of a fully assembled pre-BCR signaling complex as previously hypothesized.6 This is further supported by the recent finding that the pre-BCR surrogate light chain component VpreB was detected in subpopulations of BCP-ALL patient samples regardless of cytogenetic subgroups.15 Yet, the role of CD79b and VpreB (and other BCR components) may differ markedly in BCP-ALL. Unlike VpreB, CD79b harbors an ITAM in the cytoplasmic domain by which CD79b on the cell surface may promote downstream signaling, irrespective of a fully arranged pre-BCR complex, thereby enhancing the survival and proliferation of BCP-ALL cells. Accordingly, in our model CD79b deletion had a direct effect on ALL propagation in vivo, indicating a functional role in ALL-pathogenesis. Since CD79b immunotherapy has already entered clinical routine in other B-cell malignancies,4 PolVed therapy may represent an interesting treatment alternative for BCP-ALL, potentially also in relapsed/refractory disease. To this end, PolVed treatment was also effective in BCR-ABL+, MLLr and E2A-HLF+ PDX samples, which are considered high-risk subgroups. The prospective measurement of sCD79b+ in newly diagnosed and (CD19–) relapsed BCP-ALL patients may help to identify patients who could benefit from CD79b immunotherapy. Moreover, an important step before clinical transition will be to preclinically test the efficacy and tolerability of PolVed in combination with standard-of-care treatments using PDX models.10,11 In this respect, the efficacy of CD79b immunotherapy could be tested in comparison or combination with small molecule inhibitors targeting the pre-BCR signaling pathway.14 Overall, gaining a better understanding of the role of the various components of the pre-BCR in leukemia development and relapse may improve diagnostic and therapeutic options in BCP-ALL. ACKNOWLEDGMENTS We thank the patients and physicians who contributed samples and data for this study. We thank Katrin Timm-Richert, Katrin Neumann, Gabriele Riesen, Birthe Fedders, and Silvia Iwersen for the excellent technical assistance. AUTHOR CONTRIBUTIONS LL and DW designed and performed experiments and analyzed data. FV, AL, LS, AM, AD, GM, CV, JR, and AGP performed experiments and analyzed data. MS, GC, and MB provided ALL samples and clinical data. TS, UDK, MP, TV, and AGP discussed the research direction. EH and HJ provided mouse models. LL, AA, and DMS initiated and designed the study and discussed the research direction. LL and DMS conceived and wrote the article. All authors discussed the article. DISCLOSURES LL received research funding from OSE Immunotherapeutics outside the submitted work. MB received consulting fees from PRMA Consulting, research funding from Amgen, honoraria from Novartis, Pfizer, and Amgen and was an advisory board member for Incyte and Amgen. DMS was an advisory board member for Bayer, SOBI, and Jazz Pharmaceuticals and received research funding from OSE Immunotherapeutics. MS received research funding from Shire, and from Servier, as well as fees for Advisory Board functions from Jazz Pharmaceuticals and Servier. AGP is an employee of Genentech. Polatuzumab Vedotin was provided by Genentech, San Francisco, CA. All the other authors have no conflicts of interest to disclose. SOURCES OF FUNDING DMS is funded by the Deutsche Krebshilfe e. V. (111963), the Wilhelm Sander Stiftung (2016.110.1 and 2019.119.1), the Deutsche José-Carreras-Leukämiestiftung (DJCLS 17 R/2017), and the Deutsche Forschungsgemeinschaft (CRU5010; P6). HJ is supported by the Deutsche Krebshilfe and Deutsche Forschungsgemeinschaft (SFB1074; projects A10, B6) and European Research Council advanced grant. EH is supported by the Deutsche Krebshilfe and Deutsche Forschungsgemeinschaft (SFB1074; projects A9). METHODS Detailed information on material and methods are given in the Supplementary Material. DATA AVAILABILITY STATEMENT All data supporting the findings of this study are available within the article and its supplementary information files. No codes were used for data analysis.

https://doi.org/10.1097/hs9.0000000000000754
Drugs of today · 2013 · 10 citations

Ponatinib for the treatment of chronic myeloid leukemia andPhiladelphia chromosome-positive acute lymphoblastic leukemia

AbstractPonatinib is a novel, next-generation, small-molecule tyrosine kinase inhibitor with potent activity against the BCR-ABL fusion oncogene as well as all other ABL kinase domain mutations that confer resistance to earlier generation tyrosine kinase inhibitors. Due to its unique structure, it is the only tyrosine kinase inhibitor with the capability to counter the highly resistant T315I or gate-keeper mutation in leukemic cells that express the Philadelphia chromosome. This review will focus on the preclinical pharmacology, pharmacokinetics and clinical utility of ponatinib in the treatment of chronic myeloid leukemia and Philadelphia chromosome-positive adult acute lymphoblastic leukemia.

https://doi.org/10.1358/dot.2013.49.4.1950147
Leukemia Research Reports · 2022 · 5 citations · open access

A case of therapy-related acute lymphoblastic leukemia following the treatment of acute myeloid leukemia

AbstractTherapy-related acute lymphoblastic leukemia represents a distinct entity associated with inferior survival compared with de novo acute lymphoblastic leukemia. It consists of a subset of patients who have had exposure to chemotherapy or radiation for a previous malignancy. Here, we describe a case of acute myeloid leukemia who later developed precursor B cell acute lymphoblastic leukemia and discuss the current relevant literature. Our case highlights the importance of classifying therapy-related acute lymphoblastic leukemia as a separate as entity based on its biologic and clinical features.

https://doi.org/10.1016/j.lrr.2022.100297
PubMed · 2022 · 0 citations

[Treatment strategy for B cell precursor acute lymphoblastic leukemia in children].

AbstractOver the last 60 years, treatment outcomes for pediatric B cell precursor acute lymphoblastic leukemia have improved dramatically, resulting in long-term survival in approximately 90% of cases. These advancements are the results findings of Biological studies, their acceptance as prognostic factors for treatment responses, including MRD, and the accumulation of clinical trials including many randomized controlled trials. Further improvements in the cure rate and reduction of short-term and long-term complications will be issued in the future. To address such issues, new drugs such as immunotherapy and molecular targeted therapy, as well as more precise stratification, are required, and it is expected that progress will be made by promoting clinical trials in the future.

https://doi.org/10.11406/rinketsu.63.816
Journal of Biosciences and Medicines · 2024 · 0 citations · open access

Damage Mechanism of CK2 and IKAROS in Philadelphia Like Acute Lymphoblastic Leukemia

AbstractAcute lymphoblastic leukemia (ALL) is characterized by immature and poorly differentiated B lymphocytes in large numbers in the blood. B cells are distinct from the cell types involved in their development (common lymphoid progenitor cells, pro-B cells, pre-B cells, and mature cells). The process of B cell maturation depends on precise communication within the cell: signals activate specific genes that are essential for proper development. Errors in this intricate signaling network can lead to issues with B cell function and contribute to disease. B-lineage acute lymphoid leukemias, malignancies of precursor-stage B lymphoid cells inhibit lymphoid differentiation, leading to abnormal cell proliferation and survival. The process of developing leukemia (leukemogenesis) can be triggered by an overproduction of both hematopoietic stem cells (the cells that form all blood cells) and the immature versions of white blood cells called lymphoblasts. Acute lymphoblastic leukemia (ALL) with the presence of the Philadelphia chromosome (ALL Ph) is classified as a high-risk manifestation of the disease, this chromosome is the product of the reciprocal translocation, whose product is a BCR-ABL fusion protein. It is a highly active tyrosine kinase that can transform hematopoietic cells into cytokine-independent. Hyperphosphorylation cascades inhibit the differentiating function of IKZF1 as a tumor suppressor gene which leads to an abnormal proliferation of B cells due to the presence of the Philadelphia chromosome; it inhibits the differentiating process, leukemogenesis involving immature B cells in the bloodstream can result from the uncontrolled growth and division of hematopoietic stem cells and immature lymphoblasts (the precursors to B cells).

https://doi.org/10.4236/jbm.2024.124005

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.