Rare & Orphan Lab · DeCure for X

DeCure for Orofaciodigital syndrome 19

DeCure's autonomous Rare AI scientist is researching a drug-repurposing hypothesis for orofaciodigital syndrome 19 — screening already-approved drugs against its 1-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

Disease module1 genesLead labRare & Orphan
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Rare & OrphanDOID:0060960$DeCureRare

The disease map

Disease moduleOrofaciodigital syndrome 19 maps to a 1-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

No approved-drug candidate for orofaciodigital syndrome 19 is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.

Molecular view

sodium channel modifier 1 (SCNM1)SCNM1 is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.

Loading structure…
helix sheet ihpdrag to rotate · scroll to zoom

RCSB Protein Data Bank · entry 7DVQ · 2.89 Å · ligand INOSITOL HEXAKISPHOSPHATE (IHP). Experimental structure, not a prediction.

What the evidence adds up to

Orofaciodigital syndrome type I is an X-linked dominant condition with lethality in the vast majority of affected males, and the other types show autosomal recessive inheritance. In a 2007 report of twin girls, buccal exploration, cephalometric examination, and genetic analysis identified a previously unreported causative mutation in the OFD1 gene: a nucleotide change 243C>G leading to the missense mutation H81Q in exon 3. A 2013 case of a seven-year-old Indian girl with OFDS type I had most of the typical features and also nephrocalcinosis. A 2020 report described a young Indian child with sparse hairs, milia over the face, absence of the corpus callosum, and a frameshift pathogenic variant in exon 13 of the OFD1 gene, consistent with OFD1.

Cystic kidney disease was reported in an infant with orofaciodigital syndrome type I in a 1992 case, which the authors noted had not previously been described in an infant with the syndrome. That same girl also had unilateral tibial pseudarthrosis, which the authors stated had only rarely been reported in orofaciodigital syndromes and in type II only. A 2022 report described a male patient with OFD syndrome type XVI, caused by a homozygous variant of TMEM107 (p.Phe106del), who additionally had tibial dysplasia, a finding the authors called pivotal for OFD syndrome type IV. His family history included two fetuses with anencephaly with or without cleft lip/palate and polydactyly, but no genetic information was available for them.

The 1992 authors emphasised that an exact diagnosis among the orofaciodigital syndromes is important for genetic counselling because the inheritance patterns differ. The 2007 authors noted that their patients were diagnosed as having Orofaciodigital I syndrome. The 2013 authors reported that their patient had nephrocalcinosis. The 2020 authors stated that OFD1 presents in females with mutations in CXorf5 or OFD1 gene. The 2022 authors advised careful attention in interpreting this rare pattern.

What is still missing is any systematic clinical trial or prospective cohort that tests a treatment for any orofaciodigital syndrome subtype. No drug has been studied in these patients in the available literature. The evidence consists entirely of case reports and small case series describing genetic findings and clinical features. There is no data on disease progression, no validated outcome measures, and no patient stratification beyond genetic subtype. Funding for natural history studies and for developing any intervention is absent.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

The Cleft Palate-Craniofacial Journal · 2007 · 13 citations

Buccal Anomalies, Cephalometric Analysis and Genetic Study of Two Sisters with Orofaciodigital Syndrome Type I

AbstractOrofaciodigital syndromes have many clinical and cephalometric anomalies, including facial irregularities, oral cavity abnormalities, and malformations of fingers and toes. In this case of twin girls, buccal exploration, cephalometric examination, and genetic analysis were performed to diagnose Orofaciodigital I or Orofaciodigital II syndrome. Clinically, the twins had several dental and skeletal irregularities. Genetic analysis revealed a DNA segment abnormality corresponding to exon 3 and presence of nucleotide change, 243C>G, leading to the missense mutation H81Q. This causative mutation associated with the OFD1 gene has not been reported previously. Both patients were diagnosed as having Orofaciodigital I syndrome.

https://doi.org/10.1597/06-225.1
Journal of Medical Genetics · 1992 · 3 citations · open access

Orofaciodigital syndrome type I in a girl with unilateral tibial pseudarthrosis.

AbstractThe orofaciodigital syndromes are a group of possibly seven different malformation syndromes including oral, facial, and digital malformations. Type I has X linked dominant inheritance whereas the other types show autosomal recessive inheritance. An exact diagnosis is therefore important for genetic counselling. We here report a girl with orofaciodigital syndrome type I. She had cystic kidney disease at the age of 8 months which has not previously been reported in an infant with orofaciodigital syndrome. In addition she had unilateral tibial pseudarthrosis which has only rarely been reported in the orofaciodigital syndromes and in type II only.

https://doi.org/10.1136/jmg.29.11.827
Human Genome Variation · 2022 · 3 citations · open access

Additional findings of tibial dysplasia in a male with orofaciodigital syndrome type XVI

AbstractWe describe the case of a male patient with orofaciodigital (OFD) syndrome type XVI with a homozygous variant of TMEM107 (p.Phe106del) and the additional findings of tibial dysplasia, which is a pivotal finding of OFD syndrome type IV. His family history included two fetuses with anencephaly with or without cleft lip/palate and polydactyly with no genetic information. Careful attention should be given to the interpretation of this rare pattern.

https://doi.org/10.1038/s41439-022-00187-9
BMJ Case Reports · 2013 · 1 citations · open access

Rare case of orofaciodigital syndrome type I

AbstractOrofaciodigital syndrome (OFDS) is a group of congenital anomalies which affects the face, oral structures and digits. There are nine subtypes with different modes of inheritance. OFDS type I is an X-linked dominant trait with lethality in the vast majority of affected males. We report a case of OFDS type I in an Indian girl at the age of seven who had most of the typical features of OFDS type I and nephrocalcinosis.

https://doi.org/10.1136/bcr-2012-007733
American Journal of Medical Genetics Part A · 2020 · 0 citations

Indian child with novel variant in <scp>OFD1</scp> gene

AbstractOrofaciodigital syndrome (OFD) can have variable phenotype and presents with oral anomalies, facial dysmorphism, and digital malformations like syndactyly, and polydactyly. Other presentations also include renal and cardiac defects, and central nervous system anomalies like hydrocephalus and cerebellar abnormalities. OFD1 is a X-linked dominant form of the syndrome presenting in females with mutations in CXorf5 or OFD1 gene. We describe a young child with sparse hairs, milia over face and absence of corpus callosum. Next generation sequencing showed frameshift pathogenic variant in the exon 13 of the OFD1 gene, consistent with diagnosis of OFD1.

https://doi.org/10.1002/ajmg.a.61768

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.