DeCure for Mitochondrial pyruvate carrier deficiency
DeCure's autonomous Metabolic AI scientist is researching a drug-repurposing hypothesis for mitochondrial pyruvate carrier deficiency — screening already-approved drugs against its 2-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.
Disease moduleMitochondrial pyruvate carrier deficiency maps to a 2-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.
Research record
01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash
Current lead
No approved-drug candidate for mitochondrial pyruvate carrier deficiency is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.
Molecular view
mitochondrial pyruvate carrier 2 (MPC2) — MPC2 is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.
Loading structure…
helix sheet edrag to rotate · scroll to zoom
RCSB Protein Data Bank · entry 9MNZ · 2.73 Å · ligand (E)-2-cyano-3-(1-phenylindol-3-yl)prop-2-enoic acid (I2R). Experimental structure, not a prediction.
What the evidence adds up to
The mitochondrial pyruvate carrier was identified in yeast in 2003 by measuring inhibitor-sensitive pyruvate uptake into mitochondria from 18 different *Saccharomyces cerevisiae* mutants, each lacking an unattributed member of the mitochondrial carrier family. Only mitochondria from the YIL006w deletion mutant showed no inhibitor-sensitive pyruvate transport, but otherwise behaved normally. YIL006w encodes a 41.9 kDa protein with homologous proteins present in both the human and mouse genomes. A 2003 review noted that although the mitochondrial membrane pyruvate transporter had been characterised, its molecular identity had proved elusive, and that the identification of a single candidate protein in yeast opened the way for studies in mammalian systems.
A 2016 case report described a 32-year-old Japanese male with mitochondrial diabetes and myopathy caused by the m.14709T>C mutation. He was diagnosed with diabetes at age 20 and started insulin therapy. Water-based sodium pyruvate solutions (0.5 g/kg, thrice daily) were administered orally. His urinary C-peptide level improved from 4.3 to 17.2 μg/d after 1 day and to 30.2 μg/d after 6 months of pyruvate therapy. Total daily insulin dose decreased from 33 to 20 U/d after 6 months. The patient experienced no side effects such as diarrhoea. However, the lactate levels of plasma and cerebrospinal fluid and the lactate/pyruvate ratio did not change. The authors concluded that sodium pyruvate improved insulin secretion and resulted in decreased insulin dose in this single patient, but stated that clinical trials involving a larger number of patients and long-term evaluation are necessary.
A 2005 paper on biochemical therapy monitoring in mitochondrial encephalomyopathies stated that therapy is problematic, and that treatment involves administration of vitamins, cofactors, and modification of nutrition, such as ketogenic diet in pyruvate dehydrogenase deficiency. It noted that evaluation of the efficacy of therapeutic approaches is difficult due to the large variability of the clinical course. A 2020 systematic review on therapeutic potential of pyruvate therapy for patients with mitochondrial diseases was published, but the abstracts provided are only for its supplemental material and contain no results.
What is still missing: larger clinical trials with adequate patient numbers, long-term outcome data beyond a single case, and any evidence that pyruvate therapy affects the underlying mitochondrial defect in pyruvate carrier deficiency specifically, rather than improving insulin secretion in one patient with a different mitochondrial mutation. No trial design or patient stratification strategy for pyruvate carrier deficiency has been reported.
Evidence
Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.
Journal of Inherited Metabolic Disease · 1987 · 103 citations
Therapy of mitochondrial disorders
AbstractMitochondrial disorders, namely defects of fatty acid oxidation, defects of pyruvate metabolism and defects of the respiratory chain are heterogenous in clinical picture and in response to therapeutic attempts. Defects of fatty acid metabolism are amenable to therapy by dietary means, carnitine substitution and in some cases with vitamins. Defects in pyruvate metabolism do not respond to therapy except in some special cases. Therapeutic attempts include dietary measures, vitamins as coenzyme precursors. Defects in the respiratory chain appear to respond to treatment only in exceptional cases. Evaluation of treatment effects appears to be singularly difficult. General measures that can be of benefit to different defects are discussed.
Biochemical Journal · 2003 · 78 citations · open access
Identification of the mitochondrial pyruvate carrier in Saccharomyces cerevisiae
AbstractMitochondrial pyruvate transport is fundamental for metabolism and mediated by a specific inhibitable carrier. We have identified the yeast mitochondrial pyruvate carrier by measuring inhibitor-sensitive pyruvate uptake into mitochondria from 18 different Saccharomyces cerevisiae mutants, each lacking an unattributed member of the mitochondrial carrier family (MCF). Only mitochondria from the YIL006w deletion mutant exhibited no inhibitor-sensitive pyruvate transport, but otherwise behaved normally. YIL006w encodes a 41.9 kDa MCF member with homologous proteins present in both the human and mouse genomes.
The Journal of Clinical Endocrinology & Metabolism · 2016 · 27 citations · open access
Pyruvate Improved Insulin Secretion Status in a Mitochondrial Diabetes Mellitus Patient
AbstractCONTEXT: Mitochondrial diabetes is a rare form of diabetes mellitus accounting for up to 1% of all diabetes. Pyruvate therapy has been reported to be a potential therapeutic choice for patients with mitochondrial diseases. CASE DESCRIPTION: Water-based sodium pyruvate solutions (0.5 g/kg, thrice daily) were administrated orally to a 32-year-old Japanese male with mitochondrial diabetes and myopathy caused by m.14709T>C mutation. At the age of 20 years, he was diagnosed with diabetes mellitus and started insulin therapy. He tested negative for islet cell and glutamic decarboxylase antibodies. To evaluate favorable therapeutic improvements, we measured the lactate and pyruvate levels in plasma and cerebrospinal fluid; urinary C-peptide, glycated hemoglobin, and glycoalbumin levels; and total daily insulin dose (TDD). The patient experienced no side effects such as diarrhea because of pyruvate therapy. His urinary C-peptide level improved from 4.3 to 17.2 μg/d after 1 day and to 30.2 μg/d after 6 months of pyruvate therapy. TDD decreased from 33 to 20 U/d after 6 months of pyruvate therapy, but the lactate levels of plasma and cerebrospinal fluid and the lactate/pyruvate ratio did not change. CONCLUSIONS: Sodium pyruvate improved insulin secretion and resulted in decreased TDD in a patient with mitochondrial diabetes. Pyruvate therapy may be a potential therapeutic choice for patients with mitochondrial diabetes. Clinical trials involving a larger number of patients and long-term evaluation of the therapy are necessary to clarify the efficacy of pyruvate therapy.
INDIGO (University of Illinois at Chicago) · 2020 · 0 citations · open access
Supplement_material-ROBINS-I_tool_for_Koga,2019 – Supplemental material for Therapeutic potential of pyruvate therapy for patients with mitochondrial diseases: a systematic review
AbstractSupplemental material, Supplement_material-ROBINS-I_tool_for_Koga,2019 for Therapeutic potential of pyruvate therapy for patients with mitochondrial diseases: a systematic review by Min Li, Shuang Zhou, Chaoyang Chen, Lingyun Ma, Daohuang Luo, Xin Tian, Xiu Dong, Ying Zhou, Yanling Yang and Yimin Cui in Therapeutic Advances in Endocrinology and Metabolism
Sage Journals Data · 2020 · 0 citations · open access
Supplement_material-ROBINS-I_tool_for_Koga,2019 – Supplemental material for Therapeutic potential of pyruvate therapy for patients with mitochondrial diseases: a systematic review
AbstractSupplemental material, Supplement_material-ROBINS-I_tool_for_Koga,2019 for Therapeutic potential of pyruvate therapy for patients with mitochondrial diseases: a systematic review by Min Li, Shuang Zhou, Chaoyang Chen, Lingyun Ma, Daohuang Luo, Xin Tian, Xiu Dong, Ying Zhou, Yanling Yang and Yimin Cui in Therapeutic Advances in Endocrinology and Metabolism
Biochemical therapy monitoring with subcutaneous microdialysis in mitochondrial encephalomyopathies
AbstractAlthough a great progress has been made in the understanding of the molecular bases of mitochondrial disorders, therapy is problematic. Based on theoretical implications and in vitro experiments the treatment involves the administration of vitamins, cofactors, and modification of the nutrition, eg. Ketogenic diet in pyruvate dehydrogenase deficiency (PDH). The evaluation of the efficacy of therapeutical approaches is difficult in regard to the large variability of the clinical course.
Trials, tribulations and finally, a transporter: the identification of the mitochondrial pyruvate transporter.
AbstractPyruvate occupies a central role in energy homoeostasis, and dysregulation of its cellular disposition underlies many metabolic disturbances. Although the mitochondrial membrane pyruvate transporter has been characterized, its molecular identity has proved elusive. Recent work has now identified a single candidate protein for the mitochondrial pyruvate carrier in yeast, opening the way for further studies in mammalian systems, which may have important therapeutic applications within the context of metabolic disease.
Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.
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