Rare & Orphan Lab · DeCure for X

DeCure for Microcephalic osteodysplastic primordial dwarfism type I

DeCure's autonomous Rare AI scientist is researching a drug-repurposing hypothesis for microcephalic osteodysplastic primordial dwarfism type I — screening already-approved drugs against its 1-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

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The disease map

Disease moduleMicrocephalic osteodysplastic primordial dwarfism type I maps to a 1-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

No approved-drug candidate for microcephalic osteodysplastic primordial dwarfism type i is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.

Molecular view

cytoplasmic linker associated protein 1 (CLASP1)CLASP1 is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.

Loading structure…
helix sheet apo structuredrag to rotate · scroll to zoom

RCSB Protein Data Bank · entry 6MQ7 · 1.78 Å · ligand none (apo structure). Experimental structure, not a prediction.

What the evidence adds up to

Microcephalic osteodysplastic primordial dwarfism type I (MOPD I) is a rare autosomal recessive developmental disorder. Fewer than 100 cases of primordial dwarfism had been reported worldwide as of 2014, with MOPD I comprising fewer than 30 of those cases. The condition is characterised by extreme intrauterine growth retardation, severe microcephaly, central nervous system abnormalities, dysmorphic facial features, skin abnormalities, skeletal changes, limb deformations, and early death. In 2011, biallelic mutations in the RNU4ATAC gene, which encodes U4atac small nuclear RNA, were identified as the cause of MOPD I in 17 cases, including 15 previously unreported cases. This made MOPD I the first disease known to be associated with a defect in small nuclear RNAs.

Clinical and radiological overlap between MOPD types I and III has been noted, and the classification of patients within the spectrum remains difficult. A 1989 report described a male infant whose manifestations most closely resembled those of a patient with features overlapping both types I and III, and the distinctive neuropathology was documented. A 2000 study presented two children of consanguineous Arabic parents who showed typical growth retardation, microcephalus, facial anomalies, and osteodysplastic deformities including hip dysplasia, but notably no signs of mental retardation, which is in discrepancy with Seckel syndrome. That study concluded that MOPD has greater clinical and radiological heterogeneity than previously assumed, and that whether their cases represent a variant or a new subtype could only be resolved by further cases. The exact pathogenesis was then unknown, but autosomal recessive inheritance was considered the most probable cause.

A 2014 case reported a neonate with MOPD I who also had a subpulmonic ventricular septal defect and a dorsal interhemispheric cyst in the brain, associations not previously described. A 2023 study focused on MOPD type II, which is caused by biallelic loss-of-function variants in the PCNT gene, and is the most common form of primordial dwarfism. In three MOPD II patients, whole-exome and transcriptome sequencing revealed downregulation of key growth factors including IGF1R, IGF2R, and RAF1, and identified a shortlist of genes with deleterious rare variants. That study suggested that next-generation sequencing could be applied to characterise the complex genotypic background of MOPDII, but did not address MOPD I.

What is still missing is a larger cohort of molecularly confirmed MOPD I cases to clarify the full clinical spectrum and genotype-phenotype correlations. No targeted therapy or clinical trial has been reported for MOPD I. The pathogenesis linking RNU4ATAC mutations to the specific skeletal and neurological features remains poorly understood, and no animal model or functional study in the abstracts directly addresses this. Funding for natural history studies and for the development of cellular or animal models is lacking, and no stratification of patients by mutation type or modifier genes has been attempted.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

Clinical Genetics · 2011 · 40 citations

Microcephalic osteodysplastic primordial dwarfism type I with biallelic mutations in the <i>RNU4ATAC</i> gene

AbstractNagy R, Wang H, Albrecht B, Wieczorek D, Gillessen‐Kaesbach G, Haan E, Meinecke P, de la Chapelle A, Westman JA. Microcephalic osteodysplastic primordial dwarfism type I with biallelic mutations in the RNU4ATAC gene. Microcephalic osteodysplastic primordial dwarfism type I (MOPD I) is a rare autosomal recessive developmental disorder characterized by extreme intrauterine growth retardation, severe microcephaly, central nervous system abnormalities, dysmorphic facial features, skin abnormalities, skeletal changes, limb deformations, and early death. Recently, mutations in the RNU4ATAC gene, which encodes U4atac, a small nuclear RNA that is a crucial component of the minor spliceosome, were found to cause MOPD I. MOPD I is the first disease known to be associated with a defect in small nuclear RNAs. We describe here the clinical and molecular data for 17 cases of MOPD I, including 15 previously unreported cases, all carrying biallelic mutations in the RNU4ATAC gene.

https://doi.org/10.1111/j.1399-0004.2011.01756.x
American Journal of Medical Genetics · 1989 · 34 citations

Osteodysplastic primordial dwarfism: Report of a further case with manifestations similar to those of types I and III

AbstractWe describe a male infant with microcephalic osteodysplastic primordial dwarfism. The clinical and radiological manifestations most closely resemble those of the patient described by Winter et al. to have manifestations overlapping with both osteodysplastic primordial dwarfism types I and III. The classification of the patient within the spectrum of osteodysplastic primordial dwarfism is discussed and the distinctive neuropathology documented.

https://doi.org/10.1002/ajmg.1320330216
Zeitschrift für Orthopädie und ihre Grenzgebiete · 2000 · 2 citations

Differentialdiagnostische Überlegungen zum mikrozephalen Zwergwuchs

AbstractPURPOSE: While the rare Seckel-Syndrome is defined by clear criteria, clinical and radiologic findings for microcephalic osteodysplastic primordial dwarfism (MOPD) make an exact diagnosis and classification difficult. By comparing our patients to previously described cases of MOPD we evaluate the hypothesis that this disorder has a greater heterogeneity than has been believed up until now. Furthermore the differential diagnosis of the MOPD-complex is discussed. RESULTS: Two cases that show typical growth retardation, microcephalus and facial anomalies as well as osteodysplastic deformities including hip dysplasia are presented. The parents of both children are consanguineous and of Arabic race. In one of the children growth hormone levels were noticeably decreased. In discrepancy to the Seckel-syndrome both children showed no signs of mental retardation, therefore the classification into the heterogeneous group of microcephalic osteodysplastic primordial dwarfism (MOPD) is the most likely diagnosis. CONCLUSION: It is suggested that microcephalic osteodysplastic primordial dwarfism (MOPD) has a greater clinical and radiological expression than has been assumed up until now. Whether our results are merely a variant or suggest a new subtype of the MOPD can only be resolved by further cases. The exact pathogenesis of the disease currently remains unknown but the most probable cause is an autosomal recessive inheritance.

https://doi.org/10.1055/s-2000-10126
International Journal of Molecular Sciences · 2023 · 2 citations · open access

Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II

AbstractMicrocephalic Osteodysplastic Primordial Dwarfism type II (MOPDII) represents the most common form of primordial dwarfism. MOPD clinical features include severe prenatal and postnatal growth retardation, postnatal severe microcephaly, hypotonia, and an increased risk for cerebrovascular disease and insulin resistance. Autosomal recessive biallelic loss-of-function genomic variants in the centrosomal pericentrin (PCNT) gene on chromosome 21q22 cause MOPDII. Over the past decade, exome sequencing (ES) and massive RNA sequencing have been effectively employed for both the discovery of novel disease genes and to expand the genotypes of well-known diseases. In this paper we report the results both the RNA sequencing and ES of three patients affected by MOPDII with the aim of exploring whether differentially expressed genes and previously uncharacterized gene variants, in addition to PCNT pathogenic variants, could be associated with the complex phenotype of this disease. We discovered a downregulation of key factors involved in growth, such as IGF1R, IGF2R, and RAF1, in all three investigated patients. Moreover, ES identified a shortlist of genes associated with deleterious, rare variants in MOPDII patients. Our results suggest that Next Generation Sequencing (NGS) technologies can be successfully applied for the molecular characterization of the complex genotypic background of MOPDII.

https://doi.org/10.3390/ijms241512291
Journal of Clinical Neonatology · 2014 · 1 citations

An unusual association of microcephalic osteodysplastic primordial dwarfism type I with cardiac and brain anomalies

AbstractLess than 100 cases of primordial dwarfism have been reported worldwide out of which Microcephalic osteodysplastic primordial dwarfism type I comprise about <30 cases. We report a rare case of extreme growth failure in a neonate with primordial dwarfism of antenatal onset due to Microcephalic osteodysplastic primordial dwarfism type I. Our case is also unique in being associated with hitertho unreported association of subpulmonic ventricular septal defect and a dorsal interhemispheric cyst in the brain.

https://doi.org/10.4103/2249-4847.128743

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.