Immuno Lab · DeCure for X

DeCure for Immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias

DeCure's autonomous Immuno AI scientist is researching a drug-repurposing hypothesis for immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias — screening already-approved drugs against its 1-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

Disease module1 genesLead labImmuno
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ImmunoDOID:0061069$DeCureImmuno

The disease map

Disease moduleImmunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias maps to a 1-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

No approved-drug candidate for immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.

Molecular view

catenin beta like 1 (CTNNBL1)CTNNBL1 is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.

Loading structure…
helix sheet gtpdrag to rotate · scroll to zoom

RCSB Protein Data Bank · entry 7ABI · 8.0 Å · ligand GUANOSINE-5'-TRIPHOSPHATE (GTP). Experimental structure, not a prediction.

What the evidence adds up to

In a cohort of 138 patients with hypogammaglobulinaemia, 31 met 2019 European Society for Immunodeficiencies criteria for common variable immunodeficiency (CVID) and were grouped by age at diagnosis: 13 aged 4–18 years, 11 aged 19–50, and 7 aged 51–80. The median follow-up was 8 years. Diagnostic delay was longest in the 19–50 group (median 6 years, interquartile range 4.5–19). Among childhood-onset patients, the initial infection-predominant phenotype persisted over a median of 14 years, except in two patients with NFkB1 variants. Adults more often had combined infections and immune dysregulation. Six patients in the two older groups had agammaglobulinaemia with normal total B cells; two of these women (aged 67 and 71) had no history of infections. Two female patients had hypogammaglobulinaemia with absent B cells and predominant multiorgan autoimmunity. No paediatric patient had agammaglobulinaemia at diagnosis. Genetic variants were found in 3 of 10 tested patients: NFκB1 (two siblings), TRAF3, and a heterozygous variant of uncertain significance in DOCK8. No genetic testing was done in the oldest group. All patients received immunoglobulin replacement therapy. One patient (aged 68) died from COVID-19.

Earlier reports describe granulomatous disease in 17 hypogammaglobulinaemic CVID patients, 8 of whom had granulomas before hypogammaglobulinaemia was diagnosed. Sixteen of the 17 had deficient T-cell proliferation to mitogens. Despite standard intravenous immunoglobulin, they had substantial illness including frequent autoimmune disease. A 1993 review notes that CVID patients have increased incidence of autoimmune disease and malignancy. A 2013 case report describes a 12-year-old boy with all clinical signs of immunodeficiency, confirmed by laboratory tests, whose main treatment was lifelong immunoglobulin substitution. A 2015 case report describes an 84-year-old patient with over 30 years of recurrent infections and serum IgG below 134 mg/dL; strong hypogammaglobulinaemia had been present for over 14 years on review of earlier examinations.

A 2024 case report describes a 34-year-old man with Evans syndrome, prolonged severe CD4+ lymphocytopenia (below 60/µL for 56 months after treatment including steroids and rituximab), and hypogammaglobulinaemia. Repeated HIV tests were negative. A gene panel for immunodeficiency using next-generation sequencing found no pathogenic variants. He used continuous trimethoprim-sulfamethoxazole to prevent pneumocystis pneumonia. The report notes that common variable immunodeficiency is the most common primary immunodeficiency causing secondary autoimmune haemolytic anaemia and Evans syndrome, and that serum immunoglobulins should be tested in such patients, but that CD4+ cell count may also be needed in those with hypogammaglobulinaemia or recurrent infections.

What is still missing: prospective studies that stratify patients by age at onset, genetic findings, and lymphocyte subsets; trials testing whether earlier immunoglobulin initiation or additional immunomodulation alters the course of granulomatous or autoimmune complications; and systematic genetic evaluation in older patients to distinguish late-onset CVID from delayed diagnosis of a monogenic form.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

Annals of Internal Medicine · 1997 · 260 citations

Granulomatous Disease in Common Variable Immunodeficiency

AbstractBACKGROUND: Granulomatous lesions are occasionally found in the lymphoid or solid organs of patients with common variable immunodeficiency. OBJECTIVE: To examine the clinical and immunologic conditions in patients with common variable immunodeficiency who have granulomas. DESIGN: Case series. SETTING: Large tertiary care medical center. PATIENTS: 17 hypogammaglobulinemic patients with common variable immunodeficiency whose organ or tissue biopsy samples contained noncaseating granulomas. MEASUREMENTS: Results of lymphocyte function tests. RESULTS: Eight of 17 patients had granulomas at some point before hypogammaglobulinemia was diagnosed. Sixteen of the 17 had deficient T-cell proliferation to mitogens. Although 14 patients received standard treatment with intravenous immunoglobulin, they have had substantial illness, including frequent autoimmune disease. CONCLUSIONS: Dysregulated T-cell function or macrophage activation may have been involved in formation of granulomas and increased illness in hypogammaglobulinemic patients with common variable immunodeficiency. Delay in recognition of antibody deficiency may have contributed to the severity of illness in these patients.

https://doi.org/10.7326/0003-4819-127-8_part_1-199710150-00005
Annals of Internal Medicine · 1993 · 196 citations

New Insights into Common Variable Immunodeficiency

AbstractCommon variable immunodeficiency (CVI) is a heterogenous immunodeficiency syndrome characterized by hypogammaglobulinemia, recurrent bacterial infections, and various immunologic abnormalities. In addition to recurrent infections, patients with this syndrome also have an increased incidence of autoimmune disease and malignancy. Because the spectrum of associated diseases is broad, patients with CVI are seen by various medical specialists. This review discusses the pathogenesis, clinical manifestations, diagnosis, and treatment of CVI.

https://doi.org/10.7326/0003-4819-118-9-199305010-00011
Journal of Health Sciences · 2013 · 1 citations · open access

Common variable immunodeficiency – case report

AbstractCommon variable immunodeficiency (CVID) or acquired hypogammaglobulinemia is the type of primary immunodeficiency. Deregulation of the immune system, leading to hypogammaglobulinemia, defective activation and proliferation of T cells and dendritic cells, and malfunction of the cytokines are observed in CVID. The clinical picture of CVID varies, any organ or system can be affected, therefore the diagnosis is often difficult and delayed and sometimes is not always possible. This article describes a twelve years old boy with all the clinical signs of immunodeficiency, as confi rmed by laboratory. The main treatment consists of life-long immunoglobulin substitution in intravenous or subcutaneous form.

https://doi.org/10.17532/jhsci.2013.83
Recenti Progressi in Medicina · 2015 · 0 citations

Ritardo di diagnosi di immunodeficienza comune variabile: un caso clinico emblematico

AbstractThis case report highlights the frequent delay in diagnosis of common variable immunodeficiency. The patient, 84 years old, had over 30 years of recurrent infections. At the first visit serum IgG were less than 134 mg/dl. From the review of previous examinations strong hypogammaglobulinemia was present for over 14 years.

https://doi.org/10.1701/2074.22498
Cureus · 2024 · 0 citations · open access

Prolonged Severe CD4+ Lymphocytopenia and Hypogammaglobulinemia in Patients With Evans’ Syndrome: A Case Report

AbstractPrimary immunodeficiency (PID) is one of the causes of secondary autoimmune hemolytic anemia (AIHA) and Evans’ syndrome (ES). Serum immunoglobulins should be tested in patients with AIHA/ES, as common variable immunodeficiency is the most common PID of secondary AIHA/ES. However, it is not fully understood how immunodeficiency is assessed, in addition to serum immunoglobulins. Here, we present the case of a 34-year-old man with prolonged severe CD4+ lymphocytopenia and hypogammaglobulinemia in patients with ES despite repeated negative tests for human immunodeficiency virus antibodies. His CD4+ cell count remained below 60/µL for 56 months after treatment completion, including steroid and rituximab therapy. A gene panel test for immunodeficiency using next-generation sequencing did not reveal any pathogenic gene variants. He has been using continuously trimethoprim-sulfamethoxazole to prevent pneumocystis pneumonia due to severe CD4+ deficiency. This case highlights the need for a CD4+ cell count in some patients with AIHA/ES, such as those with hypogammaglobulinemia or recurrent infections.

https://doi.org/10.7759/cureus.75283
Journal of Human Immunity · 2025 · 0 citations · open access

A Lifelong Journey with Common Variable Immunodeficiency: Lessons from a Cohort Spanning Childhood to Old Age

AbstractIntroduction Common variable immunodeficiency (CVID) is a highly heterogeneous immunodeficiency affecting individuals of all ages. We aim to characterize its clinical and immunological features throughout all stages of life. Methods We retrospectively reviewed patients with hypogammaglobulinemia evaluated at Hospital Italiano de Buenos Aires (2000–2025). After excluding secondary causes, only those fulfilling the 2019 European Society for Immunodeficiencies criteria for CVID were included and classified into three age-at-diagnosis groups: Group 1 (4–18 years), Group 2 (19–50 years), and Group 3 (51–80 years). Results Among 138 patients with hypogammaglobulinemia, 31 CVID patients from 30 families were included: 13 in Group 1, 11 in Group 2, and 7 in Group 3. The median follow-up was 8 years (interquartile range [IQR] 5–12). Group 2 had the longest diagnostic delay (median 6 years, IQR 4.5–19). Group 1 presented predominantly with infections and maintained this phenotype over a median of 14 years (IQR 4–22), except two patients with NFkB1 variants. Group 2 commonly exhibited combined infections and dysregulation, while Group 3 showed heterogeneous presentations. Bronchiectasis was diagnosed in three patients per group. Two patients developed lymphoma after age 40, and three in Group 3 developed solid tumors, all in remission. Notably, six patients in groups 2 and 3 had agammaglobulinemia with normal total B cells, of which two women (67 and 71 years) had no history of infections. Additionally, two female patients presented with hypogammaglobulinemia and absent B cells, with predominant multiorgan autoimmunity. No pediatric patients showed agammaglobulinemia at diagnosis. Genetic variants were identified in 3 of 10 tested patients: NFκB1 (two siblings), TRAF3, and a heterozygous variant of uncertain significance in DOCK8. No genetic studies were performed in Group 3. All patients are on immunoglobulin replacement therapy. One patient (aged 68) died from COVID-19. Conclusions Most childhood-onset CVID cases preserved their initial phenotype. In adults, unexplained agammaglobulinemia or absent B cells warrant genetic evaluation. In elderly patients, findings suggest late-onset rather than delayed diagnosis. Group 1 (4-18 years)Group 2 (19-50 years)Group 3 (51-80 years)n = 13n = 11n = 7Female sex*665Age at diagnosis13 (6-16)38 (33-40)60 (58-69)Current age27 (18-28)46 (39-49)71 (67-75)Follow-up14 (4-22)8 (5-10)5 (4.5-12.5)Diagnostic delay1 (0-4)6 (4.5-19)2 (0-4)Current phenotype*-Only infections812-Only dysregulation22-Both383-Asymptomatic2Phenotype progression*​​​-Only infections that adds dysregulation133-Dysregulation that adds infections11​Infections*1195-Sinusitis141-Otitis30​-Pneumonia964-Gastrointestinal1​Bronchiectasis*333Autoimmunity*385-Cytopenias223-IBD132-Hepatitis3-Alopecia areata11Lymphoproliferation292-Splenomegaly182-Granulomatous and lymphocytic interstitial lung disease2​Neoplasia*​-Lymphoma​11-Lung cancer​2-Prostate​1-Pre-neoplastic lesions (cervical or vulvar intraepithelial neoplasm)​2Median (interquartile range 25-75).*Absolute frequency.

https://doi.org/10.70962/lasid2025abstract.29

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.