Metabolic Lab · DeCure for X

DeCure for Familial hyperlipidemia

DeCure's autonomous Metabolic AI scientist is researching a drug-repurposing hypothesis for familial hyperlipidemia — screening already-approved drugs against its 39-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

Disease module39 genesLead labMetabolic
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MetabolicDOID:1168$DeCureMetabolic

The disease map

Disease moduleFamilial hyperlipidemia maps to a 39-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

No approved-drug candidate for familial hyperlipidemia is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.

Molecular view

lipoprotein(a) (LPA)LPA is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.

Loading structure…
helix sheet 2sdrag to rotate · scroll to zoom

RCSB Protein Data Bank · entry 8TCE · 1.07 Å · ligand (2S)-3-phenyl-2-[(3R)-pyrrolidin-3-yl]propanoic acid (HWF). Experimental structure, not a prediction.

What the evidence adds up to

Familial combined hyperlipidemia is genetically heterogeneous, with the first major susceptibility locus mapped to 1q21-23 and the transcription factor USF1 identified as the underlying gene; associated variants are noncoding single nucleotide polymorphisms that affect nuclear protein binding and downstream transcript levels in fat biopsies. Modifier genes influencing the high triglyceride trait include APOC3 and APOA5, the latter being a downstream target of USF1, and linkage evidence exists for additional loci on 16q24 and 20q12-q13.1. A 1999 review of a Finnish isolate confirmed a major gene in a region syntenic to murine chromosome 3, but emphasised that familial combined hyperlipidemia is genetically heterogeneous, with modifier genes such as the apolipoprotein AI-CIII-AIV cluster and LPL identified in several populations.

A 2019 case report describes a 27-day-old neonate born of a third-degree consanguineous marriage with grade III lipemia retinalis secondary to familial combined hyperlipidemia, presenting as hypercholesterolemia or hypertriglyceridemia. A 2024 case report of a 7-year-old boy with type 1 familial hypercholesterolemia due to a mutation in the LDL receptor gene on chromosome 19 notes high risk for cardiovascular disease, cerebrovascular accidents, metabolic syndrome, and premature coronary death. A 2019 study of a four-generation Chinese Han family with hyperlipoproteinemia identified a novel heterozygous deletion of exons 3-16 of the LPA gene using next-generation sequencing and qPCR; clinical manifestations included hyperlipoproteinemia, early-onset hypertension, coronary heart disease, lipoma, cerebral infarction, and sudden death.

One intervention study, from 2002, examined a pharmacist-directed hyperlipidemia management program in 26 chronic hemodialysis patients, using HMG-CoA reductase inhibitors with a dosing algorithm. At baseline, 58% of patients were at target LDL cholesterol of ≤100 mg/dl; at 6 months, 88% achieved target (p = 0.015). Mean LDL decreased from 96 ± 5 to 80 ± 3 mg/dl (p < 0.01), and mean total cholesterol from 170 ± 7 to 151 ± 4 mg/dl (p < 0.01). Fifteen drug therapy adjustments were made, eight adverse drug reactions identified (two requiring discontinuation), and physicians were alerted to eight potential drug-drug interactions. This small, retrospective, single-centre study shows feasibility but provides no data on cardiovascular outcomes.

Reviews from 2005 and 2012 note that despite treatment guidelines, a major part of the population does not achieve recommended LDL targets, especially high-risk groups where most patients are untreated or undertreated; a programme to improve control must address patient compliance, drug efficacy, cost-benefit, and physician quality of care. New international guidelines on familial hypercholesterolaemia and other familial dyslipidaemias were published in 2012, intended to improve quality and cost effectiveness of care. What remains missing is prospective, adequately powered trial evidence linking specific genetic subtypes of familial combined hyperlipidemia to tailored treatment responses, and any outcome data showing that achieving lipid targets in these rare familial forms reduces mortality; current evidence is limited to case reports, genetic linkage studies, and one small retrospective programme.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

Current Opinion in Lipidology · 2006 · 65 citations

Genetics of familial combined hyperlipidemia

AbstractPURPOSE OF REVIEW: To provide an overview of recent advances that have defined the first putative genes behind familial combined hyperlipidemia, the most common genetic dyslipidemia and a major risk factor for early coronary heart disease. RECENT FINDINGS: The first locus for familial combined hyperlipidemia on 1q21-23 revealed a gene encoding a transcription factor critical in lipid and glucose metabolism, USF1. All the associated variants represent noncoding single nucleotide polymorphisms, one of which affects the binding site of nuclear proteins with a putative effect on transcript levels of USF1. Transcript analyses of fat biopsies have exposed risk-allele related changes in the downstream genes. Another recent clue to the molecular pathogenesis of familial combined hyperlipidemia is the association of the high triglyceride trait with the APOA5 gene, located on 11q. More familial combined hyperlipidemia genes are expected to be found, since linkage evidence exists for additional loci on 16q24 and 20q12-q13.1. SUMMARY: Genetic research of familial combined hyperlipidemia families has revealed several linked loci guiding to susceptibility genes. The USF1 transcription factor is the major gene underlying the 1q21-23 linkage. Modifying genes, especially influencing the high triglyceride trait, include APOC3 and APOA5, the latter representing a downstream target of USF1 and implying a USF1-dependent pathway in the molecular pathogenesis of dyslipidemias.

https://doi.org/10.1097/01.mol.0000226121.27931.3f
Current Opinion in Lipidology · 1999 · 56 citations

Novel genes for familial combined hyperlipidemia

AbstractFamilial combined hyperlipidemia (FCHL) is a complex genetic disorder of unknown etiology. Recently, 'modifier' genes of the FCHL phenotype, such as the apolipoprotein AI-CIII-AIV gene cluster and LPL, have been identified in several populations. A 'major' gene for FCHL has been identified in a Finnish isolate which maps to a region syntenic to murine chromosome 3 where a locus for combined hyperlipidemia has been identified. We review these and other recent studies which indicate that FCHL is genetically heterogeneous.

https://doi.org/10.1097/00041433-199904000-00005
BMC Nephrology · 2002 · 15 citations · open access

A multidisciplinary program for achieving lipid goals in chronic hemodialysis patients

AbstractBACKGROUND: There is little information on how target lipid levels can be achieved in end stage renal disease (ESRD) patients in a systematic, multidisciplinary fashion. METHODS: We retrospectively reviewed a pharmacist-directed hyperlipidemia management program for chronic hemodialysis (HD) patients. All 26 adult patients on chronic HD at a tertiary care medical facility were entered into the program. A clinical pharmacist was responsible for laboratory monitoring, patient counseling, and the initiation and dosage adjustment of an appropriate 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase inhibitor (statin) using a dosing algorithm and monitoring guidelines. The low-density lipoprotein (LDL) cholesterol goal was leq; 100 mg/dl. A renal dietitian provided nutrition counseling and the nephrologist was notified of potential or existing drug interactions or adverse drug reactions (ADRs). Patients received a flyer containing lipid panel results to encourage compliance. Data was collected at program initiation and for 6 months thereafter. RESULTS: At the start of the program, 58% of patients were at target LDL cholesterol. At 6 months, 88% had achieved target LDL (p = 0.015). Mean LDL cholesterol decreased from 96 +/- 5 to 80 +/- 3 mg/dl (p < 0.01), and mean total cholesterol decreased from 170 +/- 7 to 151 +/- 4 mg/dl (p < 0.01). Fifteen adjustments in drug therapy were made. Eight adverse drug reactions were identified; 2 required drug discontinuation or an alternative agent. Physicians were alerted to 8 potential drug-drug interactions, and appropriate monitoring was performed. CONCLUSIONS: Our findings demonstrate both feasibility and efficacy of a multidisciplinary approach in management of hyperlipidemia in HD patients.

https://doi.org/10.1186/1471-2369-3-9
Indian Journal of Ophthalmology · 2019 · 6 citations · open access

Lipemia retinalis in a 27 day old neonate: A case report

AbstractFamilial combined hyperlipidemia, which presents as hypercholesterolemia or hypertriglyceridemia, is the commonest form of genetic hyperlipidemia and is associated with premature coronary artery disease. This is a rare case report of a 27 day-old neonate born out of a third-degree consanguineous marriage, with grade III lipemia retinalis secondary to familial-combined hyperlipidemia.

https://doi.org/10.4103/ijo.ijo_1310_18
Current Opinion in Lipidology · 2005 · 2 citations

Beyond guidelines: achieving the optimum in LDL cholesterol control

AbstractPURPOSE OF REVIEW: Despite clear treatment guidelines, a major part of the population is not achieving the recommended LDL cholesterol target levels. This fact is more prominent among high-risk populations in which the majority of patients are untreated or undertreated. RECENT FINDINGS: The review will elaborate on the key issues of treating large populations: patient compliance, drug efficacy, cost-benefit, and physician quality of care. SUMMARY: A programme aimed at improving control of hyperlipidemia should address all four issues. The primary care physician should be empowered and given tools for optimizing treatment.

https://doi.org/10.1097/01.mol.0000191915.81498.f8
The British Journal of Diabetes · 2012 · 0 citations

Familial hypercholesterolaemia and dyslipidaemias: new international guidelines for clinical practice

AbstractFamilial hypercholesterolaemia (FH) presents a significant risk for early cardiovascular morbidity and mortality. Several new international guidelines on FH have been published in the last year and similarities and differences between them are described and summarised in this review. New European guidelines discuss other familial dyslipidaemias as well as FH. These guidelines should improve the quality and cost effectiveness of care provided.

https://doi.org/10.1177/1474651412449988
International Journal of Contemporary Pediatrics · 2024 · 0 citations · open access

Tuberous xanthoma in type 1 familial hypercholesterolemia

AbstractFamilial hypercholesterolemia (FH) is a genetic disease in which there is high low‑density lipoprotein cholesterol levels due to mutation in the gene encoding the receptor for low-density lipoprotein (LDL) located on chromosome 19 and the patients are at high risk for cardiovascular disease, cerebrovascular accidents, metabolic syndrome, and premature coronary death. We present this rare genetic disorder in a 7-year-old boy. The clinicians should be aware of this condition as early diagnosis and treatment can reduce the morbidity and mortality rate associated with the condition.

https://doi.org/10.18203/2349-3291.ijcp20242350
Research Square (Research Square) · 2019 · 0 citations · open access

A Novel Mutation in the Kringle IV Domain of LPA gene leading to Familial Hyperlipoproteinemia

AbstractAbstract Background This study aims to investigate the clinical characterization and causative genetic defect of a four-generation Chinese Han family with hyperlipoproteinemia. Methods The combined use of next-generation sequencing and qPCR technique was performed to investigate genetic pathology of familial hyperlipoproteinemia. Results The clinical manifestations of the family members include hyperlipoproteinemia, early-onset hypertension, coronary heart disease, lipoma, cerebral infarction and even sudden death, and a novel heterozygous deletion of 3-16 exon of LPA gene was identified to be causative for the symptoms in the family. Conclusions A novel deletion in the LPA gene was identified in a Chinese family associated with hyperlipoproteinemia, which expands the spectrum of the LPA mutation and its associated phenotype. Keywords Copy number variation; Hyperlipoproteinemia; Kringle IV; Lipoprotein(a); LPA;

https://doi.org/10.21203/rs.2.19206/v1

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works using Disease Ontology synonyms, resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.