DeCure's autonomous Cancer AI scientist is researching a drug-repurposing hypothesis for colon carcinoma — screening already-approved drugs against its 46-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.
Disease moduleColon carcinoma maps to a 46-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.
Research record
01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash
Current lead
No approved-drug candidate for colon carcinoma is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.
Molecular view
NRAS proto-oncogene, GTPase (NRAS) — NRAS is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.
Loading structure…
helix sheet gdpdrag to rotate · scroll to zoom
RCSB Protein Data Bank · entry 6ZIO · 1.55 Å · ligand GUANOSINE-5'-DIPHOSPHATE (GDP). Experimental structure, not a prediction.
What the evidence adds up to
Colorectal cancer arises through the progressive accumulation of genetic and epigenetic alterations that transform normal colonic epithelium into adenocarcinoma, a process that unfolds over 10–15 years and proceeds through parallel histologic and molecular changes. Three central tenets emerge from this analysis: cancer emerges via multi-step progression at both molecular and morphologic levels, loss of genomic stability is a key molecular step in cancer formation, and hereditary cancer syndromes frequently correspond to germline forms of key genetic defects whose somatic occurrences drive sporadic colon cancers. Specific pathogenetic mechanisms include tumour cell cohesiveness mediated by adhesion proteins, mutations and loss of heterozygosity of tumour suppressor genes such as the adenomatous polyposis coli gene, and germline mutations in mismatch repair genes causing generalised genetic instability as seen in hereditary nonpolyposis colorectal cancer.
By 2020, approximately 1,900,000 cases of colorectal cancer were detected worldwide, and the American Cancer Society identified 104,610 new cases in the United States with 53,200 deaths. The disease is a genetically inherited multifactorial condition in which genetic, immunologic and environmental factors all play significant roles in development and metastasis. Carcinogenesis involves staged interactions of suppressor genes and oncogenes, including p53, APC and KRAS, and family history of adenomatous polyposis confers high risk. Current treatment is based on radical surgery combined with systemic or local radiotherapy and chemotherapy, and although combined therapy has dramatically improved survival rates and life quality, a large percentage of patients still die of recurrence and metastasis.
For obstructed colon cancer, the key priority is urgent resolution of large bowel obstruction with ideally no compromise of oncological outcomes and low initial and permanent ostomy rates. Proactive management is pivotal to decrease the risk of perforation and septic shock, and staged procedures have an important place, offering similar treatment and outcomes as in the elective setting. The approach is tailored to the patient's condition, oncological situation and expertise of the available surgical team. New targeted drugs and chemotherapeutic drugs have led to significantly improved therapeutic efficacy and better life quality, but how to choose and use these treatments synthetically and reasonably remains a challenge to surgeons.
The foundations of the drug discovery process need reconsideration, with more emphasis on the quality of preclinical validations and the design of pertinent models, including human three-dimensional in vitro cell models and tissue explants. Current models used to study colorectal cancer include cancer cell line collections, genetically engineered mouse models, primary human tumour xenografts and ex vivo organotypic cultures. Gene therapy approaches have reached clinical testing stages, but the safety of such treatment remains a hot topic. What is still missing is robust validation of these preclinical biosystems against clinical outcomes, prospective data on how molecular stratification of patients by APC, p53 and KRAS status alters treatment response, and trial designs that address recurrence and metastasis rather than only initial tumour shrinkage.
Evidence
Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.
American Journal of Molecular Biology · 2013 · 49 citations · open access
Molecular biology of colorectal cancer: Review of the literature
AbstractColorectal cancer (CRC) results from the progressive accumulation of genetic and epigenetic alterations that lead to the transformation of normal colonic epithelium to colon adenocarcinoma. From the analysis of the molecular genesis of colon cancer, four central tenets concerning the pathogenesis of cancer have been established. The first is that the genetic and epigenetic alterations that underlie colon cancer formation promote the cancer formation process because they provide a clonal growth advantage to the cells that acquire them. The second tenet is that cancer emerges via a multi-step progression at both the molecular and the morphologic level. The third is that loss of genomic stability is a key molecular step in cancer formation. The fourth is that hereditary cancer syndromes frequently correspond to germ line forms of key genetic defects whose somatic occurrences drive the emergence of sporadic colon cancers.
Drug Discovery · 2013 · 10 citations · open access
Colon Cancer: Current Treatments and Preclinical Models for the Discovery and Development of New Therapies
AbstractConsequently, the foundations of the drug discovery process have to be reconsidered by giving definitively more emphasis to the quality of preclinical validations and by encouraging the design of new pertinent models, including human 3D (three dimensional) in vitro cell models and tissue explants. This article is intended to give an overview of the current knowledge about CRC and the different models commonly used to study CRC, in order to identify the most suitable biosystems for optimal development of new CRC therapies. The first part will describe the pathology and its molecular basis, and the various drugs that are currently in clinical use or under development. Then, in the second part we will review and discuss the use of cancer cell line collections, genetically engineered mouse models (GEM), primary human tumors xenografts (PDX) and ex vivo organotypic cultures (EVOC) to identify and validate anticancer colon therapeutics.
AbstractColorectal cancer develops as the result of the progressive accumulation of genetic and epigenetic alterations that lead to the transformation of normal colonic epithelium to colon adenocarcinoma. The fact that colon cancer develops over 10–15 years and progresses through parallel histologic and molecular changes has permitted the study of its molecular pathology in more detail than other cancer types. Consequently, the specific nature of many of these cancer-associated genetic alterations has been determined over the last 15 years. The subsequent effect of these alterations on the cell and molecular biology of the cancer cells in which they occur has also begun to be revealed over the last decade. From the analysis of the molecular genesis of colon cancer, three key themes concerning the molecular pathogenesis of cancer have been established. The first is that cancer emerges via a multistep progression at both the molecular and the morphologic levels (). The second is that loss of genomic stability is a key molecular and pathophysiologic step in cancer formation (). The third is that hereditary cancer syndromes frequently correspond to germline forms of key genetic defects whose somatic occurrences drive the emergence of sporadic colon cancers ().
Advances in Anatomic Pathology · 1996 · 4 citations
New Developments in the Molecular Pathology of Human Colon Cancer
AbstractHuman colon cancer is rapidly becoming a paradigm in the study of cancer biology. This review explores some of the recent developments in the molecular pathology of this tumor. There major pathogenetic mechanisms are discussed: (1) tumor cell cohesiveness mediated by proteins involved in cell–cell and cell–matrix adhesion; (2) mutations and loss of heterozygosity of tumor suppressor genes, leading to critical steps in the progression to adenoma and carcinoma, as illustrated by the adenomatous polyposis coli gene; and (3) germline mutations in mismatch repair genes causing generalized genetic instability as observed in hereditary nonpolyposis colorectal cancer. The recent advances in molecular biology techniques have enhanced the understanding of the genetic events that occur in tumorigenesis and may now be applied in the development of new diagnostic and treatment strategies.
Cancer colique en occlusion : quelle prise en charge en 2022 ?
AbstractThe key priority for obstructed colon cancer (OCC) is urgent resolution of the large bowel obstruction with ideally no compromise of oncological outcomes and low initial and permanent ostomy rates. Proactive management is pivotal to decrease the risk of perforation and septic shock. Staged procedures have an important place to provide optimal treatment and offer similar treatment and outcomes as in the elective setting. The approach is tailored to the patient's condition, the oncological situation and expertise of the available surgical team. This overview concludes by proposing a comprehensive treatment algorithm for individualized treatment of OCC.
Progress in the studies of colon cancer recurrence
AbstractColon cancer is one of the most common cancers in China, with an increasing incidence these years. Currently, the combined therapy based on radical surgery has dramatically improved the survival rate and life quality of patients, however, a large percentage of patients still died of recurrence and metastasis. In recent years, the treatment strategies for the recurrence of colon cancer have been greatly advanced, especially the new targeted drugs and chemotherapeutic drugs, which lead to a significantly improved therapeutic efficacy and a better life quality. Therefore, how to choose and use these new treatments synthetically and reasonably become a great challenge to all surgeons, especially to digestive surgeons.
Key words:
Colon cancer; Recurrence
AbstractSurgical treatment of colon cancer is the first choice in the therapy stages,supplemented with systemicor local radiotherapy and chemotherapy.With the developement of molecular biology,there has been a variety of treatment program,some of these methods have been accepted in clinical testing stage.But the safety of the treatment on colon cancer is still a hot topic.
Key words:
colon cancer; cene therapy; safety
EXPERIMENTAL & CLINICAL MEDICINE GEORGIA · 2021 · 0 citations · open access
STUDY OF VARIABILITY IN THE ACTIVITY OF RIBOSOMAL CISTRONES IN COLORECTAL CANCER
AbstractAccording to the World Health Organization, colon cancer is one of the most common cancers. By 2020, approximately 1,900,000 cases of CRC were detected worldwide (a total of 10%). In 2020, American Cancer Society 104,610 new cases of CRC were identified and 53,200 patients died. Similar to other tumors colon cancer (CRC) is a genetically inherited multifactorial disease. It is established that genetic, immunologic, as well as environmental factors, all play significant role in CRC development and metastasis. As mentioned, carcinogenesis is associated with the whole number of genetic phenomena ongoing in certain groups of the genes; it is of staged nature and includes interactions of gene suppressors and oncogenes. Many genes responsible for CRC development were identified, family forms were described as well. In particular, high risk of CRC development in case of family history of adenomatous polyposis was demonstrated. As mentioned, neoplastic variability of the tumors is associated with changed morphogenesis of the nucleus, in turn, playing certain role in regulation of the suppressor genes p53, APC and pro-carcinogenesis KRAS.
Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works using Disease Ontology synonyms, resolved on OpenAlex.
DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.