Rare & Orphan Lab · DeCure for X

DeCure for Bile Duct Adenoma

DeCure's autonomous Rare AI scientist is researching a drug-repurposing hypothesis for Bile Duct Adenoma — screening already-approved drugs against its 2-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

Disease module2 genesLead labRare & Orphan
All cures
Rare & OrphanDOID:5381$DeCureRare

The disease map

Disease moduleBile Duct Adenoma maps to a 2-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

No approved-drug candidate for bile duct adenoma is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.

Molecular view

KRas proto-oncogene, GTPase (KRAS)KRAS is one of the genes genetically linked to this disease in Open Targets — shown as context, not as a drug target we're pursuing: no approved-drug candidate for this disease is yet corroborated in the literature we found.

Loading structure…
helix sheet gnpdrag to rotate · scroll to zoom

RCSB Protein Data Bank · entry 7VVB · 1.7 Å · ligand PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER (GNP). Experimental structure, not a prediction.

What the evidence adds up to

Bile duct adenoma is an extremely rare entity with only a few reported cases and limited knowledge about its natural progression. One case of biliary adenofibroma, a benign liver tumor of bile duct origin, showed transformation to intrahepatic cholangiocarcinoma. In a small series of three patients with tubular adenoma in the extrahepatic bile duct, all underwent resection of the common bile duct and Roux-en-Y cholangioenterostomy and recovered well; two of the three had moderate atypical hyperplasia on pathology. No drug treatment was used in any of these cases.

For distal common bile duct adenoma presenting with acute cholangitis, one patient was treated endoscopically with a combination of snare polypectomy and argon plasma coagulation. The authors note that appropriate therapeutic strategies for distal CBD adenomas have not been clearly defined. For adenocarcinoma of the extrahepatic bile ducts, surgical resection remains the gold standard, but management of loco-regional recurrences is not well defined; decisions are made based on clinical parameters from retrospective series such as tumor grade, surgical margins, or lymph node involvement.

No systemic drug therapy, targeted agent, or immunotherapy is reported for bile duct adenoma in these abstracts. One review of intrahepatic cholangiocarcinoma (a separate malignancy) states that surgical resection is the only effective treatment, that patients are often diagnosed at an advanced stage, and that mortality remains high; it discusses molecular targeted therapy as a topic of progress but provides no drug names or trial results for adenoma.

What is still missing: prospective studies that include molecular and genetic markers to improve patient selection and outcomes, a clearly defined therapeutic strategy for distal CBD adenomas, and any drug-repurposing trial or preclinical work specifically for bile duct adenoma. No funding source or trial design for such work is reported.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

Case Reports in Surgery · 2022 · 10 citations · open access

Biliary Adenofibroma: A Rare Liver Tumor with Transition to Invasive Carcinoma

AbstractBiliary adenofibroma is a rare benign liver tumor with potential for malignant transition. It has a bile duct origin characterized by a complex tubulocystic biliary epithelium with fibrous stroma. MRI features may suggest this uncommon entity, and histological findings can be diagnostic. We report a case of biliary adenofibroma with transformation to an intrahepatic cholangiocarcinoma.

https://doi.org/10.1155/2022/5280884
Journal of Interventional Gastroenterology · 2012 · 6 citations

A combination of snare polypectomy and apc therapy for prolapsing common bile duct adenoma

AbstractBile duct adenomas are an extremely rare entity with only a few reported cases in the literature and limited knowledge about its natural progression. Appropriate therapeutic strategies for distal common bile duct (CBD) adenomas have not been clearly defined. We report a patient with distal CBD adenoma who presented with acute cholangitis and treated endoscopically with a combination of snare polypectomy and Argon Plasma Coagulation (APC).

https://doi.org/10.4161/jig.23743
World Journal of Surgical Oncology · 2009 · 3 citations · open access

Isolated recurrence of distal adenocarcinoma of the extrahepatic bile duct on a draining sinus scar after curative resection: Case Report and review of the literature

AbstractBACKGROUND: Surgical resection remains the gold standard for the treatment of localized adenocarcinoma of the extrahepatic bile ducts. Yet, treatment of loco-regional recurrences is not well defined. CASE PRESENTATION: We present an unusual case of distal adenocarcinoma of the extrahepatic bile ducts that was treated with surgery and relapsed two years later with a solitary recurrence on the tract of a previous Redon drain. In addition, a review of the literature on management of loco regional relapses is presented. CONCLUSIONS: The ideal management of these patients still remains undefined. Decisions are made based on clinical parameters from retrospective series, such as tumor grade, surgical margins or lymph node involvement. Prospective studies, that include molecular and genetic markers, are needed to improve patient selection and outcomes on this population.

https://doi.org/10.1186/1477-7819-7-96
Zhōnghuá xiāohuà wàikē zázhì/Zhonghua xiaohua waike zazhi · 2013 · 0 citations

Diagnosis and treatment of tubular adenoma in the extrahepatic bile duct

AbstractObjective To study the clinical manifestations,diagnosis and surgical treatment of tubular adenoma in the extrahepatic bile duct.Methods The clinical data of 3 patients with tubular adenoma in the extrahepatic bile duct who were admitted to the Affiliated Hospital of Inner Mongolia Medical University from July 2010 to February 2012 were retrospectively analyzed.Results The tumors were located at the middle and lower part of the common bile duct.All the 3 patients received resection of the common bile duct and Roux-en-Y cholangioenterostomy,and recovered well.The results of pathological examination showed that all the patients were with tubular adenoma,and 2 patients had moderate atypical hyperplasia.Conclusions Tubular adenoma in the extrahepatic bile duct could be diagnosed by pathological examination.Radical resection and rerouting of the bile duct can get a better outcome. Key words: Biliary neoplasms;  Tubular adenoma in the extrahepatic bile duct;  Choledochoscope ;  Surgical procedures, operative

https://doi.org/10.3760/cma.j.issn.1673-9752.2013.07.016
Zhonghua gan-dan waike zazhi · 2020 · 0 citations

Precise treatment of intrahepatic cholangiocarcinoma

AbstractAlthough surgical resection is currently recognized as the only effective treatment for intrahepatic cholangiocarcinoma (ICC), it is extremely difficult to diagnose because there are no obvious clinical symptoms at the early stage. Patients are often diagnosed at the advanced stage and the lesion cannot be resected which leads to limited systemic chemotherapy. So the mortality is still high. Accurate treatment is a hot topic in the medical field, and more and more attentions have been paid to enhance the treatments of patients. This article reviewed the issues related to surgical treatment, chemotherapy, molecular targeted therapy, and immunotherapy in patients with ICC, and focuses on the latest progress of molecular targeted therapy. Key words: Bile duct neoplasms; Intrahepatic cholangiocarcinoma; Precise treatment; Molecular targeted therapy

https://doi.org/10.3760/cma.j.issn.1007-8118.2020.02.016

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.