Rare & Orphan Lab · DeCure for X

DeCure for Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins

DeCure's autonomous Rare AI scientist is researching a drug-repurposing hypothesis for acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins — screening already-approved drugs against its 2-gene Open Targets disease module to publish open-access research. Research is fast; the path to publication is funded in milestone stages.

Disease module2 genesLead labRare & Orphan
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Rare & OrphanDOID:0080778$DeCureRare

The disease map

Disease moduleAcute infantile liver failure due to synthesis defect of mtDNA-encoded proteins maps to a 2-gene Open Targets module — the target space DeCure's AI scientist screens approved drugs against.
DeCure.ai methodSignature reversal (LINCS) plus network proximity (STRING) rank already-approved drugs likely to perturb this module — the same engine that produces DeCure.ai's repurposing hypotheses.
Repurposing thesisScreening approved medicines against this disease module, then publishing the evidence for the strongest candidate. Known pharmacology and human exposure data make the first question sharper — they do not establish safety or efficacy in a new indication.

Research record

01
ResearchComing soon
Candidate research + dossier — target rationale, drug-repurposing thesis and evidence pack.proof: Published dossier + on-chain hash
02
ValidationComing soon
In-vitro biological validation at a contract research org (CRO).proof: CRO contract + in-vitro report
03
Peer review & paperComing soon
Peer-reviewed paper published open-access (preprint + journal).proof: DOI + open-access link + on-chain hash

Current lead

No approved-drug candidate for acute infantile liver failure due to synthesis defect of mtdna-encoded proteins is corroborated in the literature DeepSearch retrieved. Some conditions are managed with non-pharmacological care — a device, surgery or physical therapy — rather than a medicine; that may be the case here, or the literature we found may simply be too sparse yet to support a drug-repurposing angle.

What the evidence adds up to

Mitochondrial hepatopathies collectively account for about 20% of infant acute liver failure cases in two studies cited in a 2021 review. These disorders include mitochondrial depletion syndromes (MDS), where mtDNA copy number is reduced, and mitochondrial translation disorders. The 2021 review states that mortality is high and that curative treatments are unavailable. A 2020 Orphanet entry describes a specific entity, acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins, as very rare, reported in fewer than 10 infants, primarily of Middle Eastern descent, and characterised by transient but life-threatening liver failure with elevated liver enzymes, jaundice, vomiting, coagulopathy, hyperbilirubinemia, and lactic acidemia.

A 2018 study of liver histopathology in 13 children who died from hepatocerebral MDS with confirmed mutations in DGUOK, MPV17, and POLG found a moderately reproducible pattern of parenchymal damage. A 2023 case report describes a neonate with an MPV17 gene missense homozygous pathogenic variant who presented with septic shock, hypoglycaemia, jaundice, hypotonia, and rotatory nystagmus, and died at age 2 weeks with refractory ascites. The 2021 review notes that valproate triggers fulminant liver failure in MDS and is contraindicated; paediatric valproate-induced liver failure should be assumed to be MDS.

The 2021 review reports that evidence-based management guidelines are lacking. Supportive measures are the mainstay. N-acetylcysteine is mentioned as a potential therapy that may ameliorate oxidative stress. For TRMU deficiency, cysteine supplementation is indicated. Liver transplantation is controversial: good outcomes have been reported in patients with mild MPV17 and DGUOK without neurological involvement, but post-transplant disease worsening has been observed in MDS with any neurological involvement, especially POLG. The 2021 review notes that recovery is possible with appropriate medical support in some cases, for example acute infantile liver failure caused by mutations in TRMU. What remains missing are prospective trials, standardised management protocols, and reliable criteria for selecting patients who might benefit from transplantation without post-transplant deterioration.

Evidence

Retrieved by DeepSearch across 234,678,978 indexed works and resolved on OpenAlex — ranked by citations, including the results that did not work.

Clinical Liver Disease · 2021 · 12 citations · open access

Mitochondrial Hepatopathies

AbstractContent available: Author Interview and Audio Recording Answer questions and earn CME Mitochondria play critical roles in energy, calcium, iron, and reduction/oxidation homeostasis, as well as regulation of apoptosis. They are the only organelle that contains its own circular genomes (mitochondrial DNA [mtDNA]). Maternally inherited mtDNA houses 37 genes encoding mitochondrial transfer RNAs (tRNAs), ribosomal RNA, and 13 proteins that exclusively function as subunits of the oxidative-phosphorylation machinery. Additional proteins critical to mitochondrial structure and function are encoded by the nuclear genome. Mitochondrial disorders include defects in oxidative-phosphorylation complexes, mtDNA maintenance, and mtDNA transcription and translation and can result from mitochondrial or nuclear mutations and yield disease involving virtually every organ system, including the liver. Mitochondrial hepatopathies are heterogenous and individually rare, but collectively they comprise an important cause of early liver failure. In two studies of infants with acute liver failure, about 20% of cases were attributable to mitochondrial pathology.1, 2 Mitochondrial liver disease may manifest as liver failure (acute, chronic, or recurrent), cholestasis, liver fibrosis, or elevated transaminases (Table 1). Presentation is typically pediatric. A mitochondrial etiology is especially likely in cases with multisystem involvement but is also associated with isolated hepatopathy. Low birth weight and intrauterine growth restriction have been associated.3, 4 Lactic acidosis and hypoglycemia are common biochemical features5, 6 and could lead to the misdiagnosis of other conditions, such as glycogen storage disease type I.6 Mitochondrial depletion syndromes (MDSs) feature decreased mtDNA copy number secondary to defects in mtDNA replication. MDSs may present with infantile hepatocerebral syndrome with acute or chronic liver failure. Mortality is high. Hepatocellular carcinoma is a complication in survivors (DGUOK and MPV17).4, 5 Affected infants typically present with growth failure, feeding difficulty, developmental delay, and hypotonia. Although brain involvement is usually prominent, in rare cases DGUOK may cause isolated liver failure. In POLG disease, brain involvement may not be immediately apparent, but developmental regression and epilepsia partialis continua are inevitable. Valproate triggers fulminant liver failure in MDS7 and is contraindicated. Pediatric valproate-induced liver failure should be assumed to be MDS. Mitochondrial neurogastrointestinal encephalomyopathy (MNGIE) secondary to thymidine phosphorylase deficiency is an adolescent-onset MDS that may have cirrhosis, as well as gastrointestinal dysmotility, peripheral neuropathy, and asymptomatic leukoencephalopathy.8 Single large-scale mtDNA deletions cause a spectrum of phenotypes, including Pearson syndrome, a severe disease characterized by sideroblastic anemia and exocrine pancreatic insufficiency. More than 33% of patients have liver involvement (hepatomegaly, cholestasis, and/or progressive liver failure). Kearns-Sayre syndrome develops in childhood in survivors. Point mutations in mtDNA almost never cause liver disease.9 Mitochondrial translation disorders are also characterized by early-onset liver failure with frequent neurological manifestations. Early diagnosis and management are critical because recovery is possible with appropriate medical support, for example, acute infantile liver failure caused by mutations in TRMU.6 Mitochondrial hepatopathy is also associated with deficiency of individual oxidative-phosphorylation complexes, for example, BCS1L mutations cause infantile cholestasis with liver iron overload and multisystemic features.4 Diagnostic work-up for suspected mitochondrial hepatopathy includes full phenotyping, biochemical studies, functional studies, and genetic confirmation.10 Cardiac, neuromuscular, retinal, or auditory involvement may raise suspicion for mitochondrial disease generally, but specific features may be diagnostic. Peripheral neuropathy (MPV17), pili torti (BCS1L), rotary nystagmus (DGUOK), and sideroblastic anemia (mtDNA deletion) can be observed (Fig. 1). Biochemical laboratory testing, including amino acids, organic acids, and lactate/pyruvate and acylcarnitine profiles, are not sensitive but can strongly increase suspicion for mitochondrial disease. Pathological examination of liver tissue plays a key role in confirming a clinical suspicion of mitochondrial hepatopathy and directing future testing (Fig. 2). Light microscopic findings are variable and depend on genetic lesion, patient age, and disease severity at time of biopsy. Classical findings beyond early infancy include nonzonal mixed (macrovesicular and microvesicular) steatosis, variable fibrosis, and presence of oncocytic hepatocytes with granular, hypereosinophilic cytoplasm. Electron microscopy shows this oncocytic change reflects proliferation of structurally abnormal mitochondria, characterized by lack of cristae, tubular cristae, and/or electron-dense matrix granules. The light microscopic differential diagnosis includes other metabolic disorders, Wilson disease, and secondary mitochondrial dysfunction as a result of drug toxicity; ultrastructural changes, including mitochondrial proliferation, are more specific for primary mitochondrial disorders. Mitochondrial hepatopathy is also a significant causative factor for congenital liver failure, where the histological picture may be of neonatal (giant cell) hepatitis, or even so-called neonatal hemochromatosis: hepatic parenchymal collapse with massive ductular proliferation, cholestasis, and evidence of siderosis both in liver and extrahepatic tissues. In such cases, classic histological and ultrastructural features may be absent; ancillary testing of rapidly procured postmortem tissue is required to establish the diagnosis. The differential diagnosis in these cases includes gestational alloimmune liver disease, congenital infection, or other metabolic disorders. Acquiring tissue samples enables functional mitochondrial testing. Electron transport enzymology is sensitive for BCS1L (complex III) and SCO1 (complex IV) deficiency. BN-PAGE can suggest mitochondrial translation defects; mtDNA quantification is the diagnostic gold standard for MDS diagnosis. Functional testing is most sensitively performed on liver tissue. Because there is a high degree of phenotype overlap, whole-exome sequencing is often the most effective way to reach a definitive diagnosis. Analysis of mtDNA to rule out deletion is also warranted. Evidence-based management guidelines for mitochondrial hepatopathies are lacking, and curative treatments are unavailable. Supportive measures led by a multidisciplinary team are the mainstay of therapy. Early introduction of enteral feeding optimizes mitochondrial function and minimizes lactic acidosis. Feeding tube placement may be required to ensure adequate nutritional support for patients. Avoidance of fasting and/or frequent feedings can prevent hypoglycemia. Specific therapies are indicated for some diagnoses: branched-chain amino acid restriction and riboflavin supplementation for dihydrolipoamide dehydrogenase (DLD) deficiency, and cysteine supplementation for TRMU deficiency.6 Liver transplantation for mitochondrial hepatopathy is controversial. Good outcomes have been reported in patients with mild MPV17 and DGUOK without neurological involvement.3, 5 However, posttransplant disease worsening has been observed in patients with MDS with any neurological involvement, especially in POLG. Generally, liver transplant is not contraindicated, but risks and benefits should be carefully evaluated. Posttransplant management is challenging because some immunomodulators are mitotoxic. Hematopoietic stem cell transplant has resulted in clinical improvement in some patients with MNGIE.8 Mitochondrial dysfunction is associated with impaired redox homeostasis and glutathione depletion. N-acetylcysteine may ameliorate oxidative stress and is a potential therapy for mitochondrial hepatopathies.6 Gene therapy has shown experimental success for several monogenic liver disorders. The liver is amenable to gene therapy: it is easily targeted by adeno-associated virus vectors and is a lifelong replicating tissue.11 Therefore, it holds future promise as a therapeutic option for mitochondrial hepatopathies. Mitochondrial hepatopathies are an important cause of infantile/pediatric liver failure. They should be suspected in patients with neonatal-onset liver dysfunction, steatosis, fulminant or acute disease, or in individuals with neuromuscular or multiorgan involvement. 1. What are clinical features that should increase suspicion for underlying mitochondrial hepatopathy? Mitochondrial hepatopathy should be suspected in cases of neonatal-onset liver dysfunction, steatosis, fulminant, or acute disease, or in individuals with neuromuscular or multiorgan involvement. 2. How are mitochondrial hepatopathies diagnosed? Diagnosis of mitochondrial hepatopathies is multifaceted and includes biochemical and genetic testing, pathological examination of liver tissue, and functional mitochondrial enzymology. 3. How are mitochondrial hepatopathies treated? Treatment for mitochondrial hepatopathy is largely supportive. N-acetylcysteine may be helpful. Mitochondrial hepatopathy is not an absolute contraindication for consideration of transplantation.

https://doi.org/10.1002/cld.1133
Polish Journal of Pathology · 2018 · 6 citations · open access

Histopathological liver findings in patients with hepatocerebral mitochondrial depletion syndrome with defined molecular basis

AbstractMitochondrial DNA depletion consisting of the systemic reduction of mtDNA copy number in cells may have a heterogenous genetic basis, resulting from a pathogenic change in the nuclear genes involved in mtDNA synthesis. The mode of inheritance is autosomal recessive. Severe hepatocerebral disease represents one of many different clinical forms of so-called mitochondrial depletion syndrome (MDS). We present the liver histopathology of 13 children who eventually died in the course of hepatocerebral MDS confirmed molecularly, harbouring mutations of <i>DGUOK</i>, <i>MPV17</i>, and <i>POLG </i>genes. Material comprising eight autopsy and five liver biopsy specimens showed a moderately reproducible pattern of parenchymal damage, which we consider potentially helpful in the differential diagnosis and planning of the diagnostic investigation in families of children who died due to early-onset acute liver failure and encephalopathy.

https://doi.org/10.5114/pjp.2018.79549
Case Reports in Hepatology · 2023 · 5 citations · open access

Fulminant Neonatal Liver Failure in MPV 17-Related Mitochondrial DNA Depletion Syndrome

AbstractMitochondrial depletion syndromes are well established causes of liver failure in infants. Hepatocerebral variant related to MPV17 gene defect is characterized by infantile onset of progressive liver failure, developmental delay, neurological manifestations, lactic acidosis, hypoglycemia, and mtDNA depletion in liver tissue. We report a hepatocerebral variant of mitochondrial DNA depletion syndrome in a neonate who presented with septic shock picture, hypoglycemia, jaundice, hypotonia, and rotatory nystagmus. Family history was significant for consanguinity and a brother who died at the age of 4 months. Investigations showed mild liver function derangement contrasting with severe coagulopathy, hyperlactatemia, and generalized aminoaciduria. The brain MRI was normal. Next generation sequencing (NGS) panel identified a MPV17 gene missense homozygous pathogenic variant. The infant expired at the age of 2 weeks with refractory ascites. This case illustrates a challenging diagnosis causing liver failure and death in neonatal period. Genetic testing of mitochondrial DNA depletion syndromes should be a part of liver failure workup in addition to other treatable disorders presenting with encephalo-hepatopathy in infancy.

https://doi.org/10.1155/2023/4514552
Definitions · 2020 · 0 citations · open access

Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins

AbstractOpe n Pe e r Re v ie w on Qe ios Ope n Pe e r Re v ie w on Qe ios Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins INSERM Source INSERM.(1999).Orphanet: an online rare disease and orphan drug data base.Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins.ORPHA:217371 Acute infantile liver failure due to mtDNA-encoded proteins synthesis defect is a very rare mitochondrial respiratory chain deficiency described in fewer than 10 infants, primarily of middle Eastern descent, and characterized clinically by transient but life-threatening liver failure with elevated liver enzymes, jaundice, vomiting, coagulopathy, hyperbilirubinemia, and lactic acidemia.

https://doi.org/10.32388/o3oi4v

Disease module: DeepOracle (Open Targets). Structures: RDKit from PubChem SMILES. Literature: retrieved by DeepSearch across 234,678,978 indexed works (targeted per-candidate search), resolved on OpenAlex.

DeCure is a research and publication project, not medical advice and not a treatment. "DeCure for X" describes a research goal, not a claim that a cure exists. Backing a cure is a contribution to fund the research — it is not an investment, and confers no yield, royalty, equity or IP ownership. Papers are published open-access by the DeCure.ai DAO.